Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NEIL3Q8TAT5 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 AC148477.4-201ENST00000613430 1793 ntBASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 TDH-203ENST00000531764 1110 ntBASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 BTNL10-201ENST00000595971 695 ntBASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.07□□□□□ -0.16
NEIL3Q8TAT5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 KRT43P-201ENST00000434019 910 ntBASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 AC234783.1-201ENST00000441761 496 ntBASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 USP32P1-208ENST00000506594 1164 ntBASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 AC026410.3-201ENST00000514280 936 ntBASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 PTP4A1P2-201ENST00000546033 454 ntBASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 MIR5189-201ENST00000577370 114 ntBASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.06□□□□□ -0.16
NEIL3Q8TAT5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms