Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 TSPY26P-202ENST00000565928 3884 ntBASIC16.16■□□□□ 0.18
BEST2Q8NFU1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 AC011840.2-201ENST00000563063 1520 ntBASIC16.16■□□□□ 0.18
BEST2Q8NFU1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 AC015818.8-201ENST00000587907 1519 ntBASIC16.16■□□□□ 0.18
BEST2Q8NFU1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 RN7SKP175-201ENST00000408472 289 ntBASIC16.16■□□□□ 0.18
BEST2Q8NFU1 AC079178.1-201ENST00000420915 656 ntBASIC16.16■□□□□ 0.18
BEST2Q8NFU1 GOLGA2P4-201ENST00000441462 777 ntBASIC16.16■□□□□ 0.18
BEST2Q8NFU1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BEST2Q8NFU1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 AC104640.1-201ENST00000562617 2109 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 MIR326-201ENST00000362220 95 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 RN7SKP230-201ENST00000365642 335 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 BTBD6P1-201ENST00000412176 1267 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 MTX1P1-201ENST00000440904 838 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 AL023775.1-201ENST00000454907 1746 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 PFN1P12-201ENST00000455938 534 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 FAM8A2P-201ENST00000528813 1142 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 SALL4P5-201ENST00000419001 1760 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 AC003102.2-201ENST00000589195 1469 ntBASIC16.15■□□□□ 0.18
BEST2Q8NFU1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BEST2Q8NFU1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
BEST2Q8NFU1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms