Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 AC020910.6-201ENST00000623084 1459 ntBASIC11.31□□□□□ -0.6
NUP35Q8NFH5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NUP35Q8NFH5 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 FAM220BP-201ENST00000377689 816 ntBASIC11.3□□□□□ -0.6
NUP35Q8NFH5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 TSPY19P-201ENST00000418461 509 ntBASIC11.3□□□□□ -0.6
NUP35Q8NFH5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 TSPY18P-201ENST00000441642 509 ntBASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AC108751.1-201ENST00000490852 363 ntBASIC11.3□□□□□ -0.6
NUP35Q8NFH5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AC096734.2-201ENST00000562054 433 ntBASIC11.3□□□□□ -0.6
NUP35Q8NFH5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AC023141.13-201ENST00000604991 943 ntBASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AL031008.1-201ENST00000619963 541 ntBASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AC007064.4-201ENST00000637740 555 ntBASIC11.3□□□□□ -0.6
NUP35Q8NFH5 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AC111170.3-201ENST00000624282 2464 ntBASIC11.3□□□□□ -0.6
NUP35Q8NFH5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NUP35Q8NFH5 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 BEND3P3-201ENST00000611030 2440 ntBASIC11.29□□□□□ -0.6
NUP35Q8NFH5 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
NUP35Q8NFH5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms