Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 AL162727.3-201ENST00000635661 2787 ntBASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 AC025183.3-201ENST00000623526 1482 ntBASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 AL592076.1-201ENST00000424448 303 ntBASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 PGAM1P12-201ENST00000505622 748 ntBASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 ALG1L13P-202ENST00000519320 584 ntBASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 AC068867.1-201ENST00000559855 150 ntBASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 AC244250.3-201ENST00000620749 366 ntBASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.74□□□□□ -0.21
COL27A1Q8IZC6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 AGGF1P1-201ENST00000509500 2073 ntBASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 AL109954.1-202ENST00000564051 2148 ntBASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 RN7SL470P-201ENST00000583069 259 ntBASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 AL133467.4-201ENST00000602953 725 ntBASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COL27A1Q8IZC6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 AC138035.3-201ENST00000622706 2791 ntBASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL27A1Q8IZC6 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms