Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHPFQ8IZ52 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHPFQ8IZ52 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.33■□□□□ 0.05
CHPFQ8IZ52 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.33■□□□□ 0.05
CHPFQ8IZ52 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CHPFQ8IZ52 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHPFQ8IZ52 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CHPFQ8IZ52 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHPFQ8IZ52 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.33■□□□□ 0.05
CHPFQ8IZ52 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AC006058.4-201ENST00000624016 1670 ntBASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AC005077.2-201ENST00000449786 690 ntBASIC15.33■□□□□ 0.04
CHPFQ8IZ52 BX284668.4-201ENST00000453917 508 ntBASIC15.33■□□□□ 0.04
CHPFQ8IZ52 DUX4L47-201ENST00000566374 394 ntBASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AC004466.1-201ENST00000599515 1080 ntBASIC15.33■□□□□ 0.04
CHPFQ8IZ52 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AL451050.2-201ENST00000606967 682 ntBASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AP001002.3-201ENST00000623482 206 ntBASIC15.33■□□□□ 0.04
CHPFQ8IZ52 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHPFQ8IZ52 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 LINC02228-204ENST00000642115 2962 ntBASIC15.32■□□□□ 0.04
CHPFQ8IZ52 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AL136309.1-201ENST00000403917 691 ntBASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC026434.2-201ENST00000506094 1078 ntBASIC15.32■□□□□ 0.04
CHPFQ8IZ52 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC090616.6-203ENST00000579186 1945 ntBASIC15.32■□□□□ 0.04
CHPFQ8IZ52 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
CHPFQ8IZ52 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHPFQ8IZ52 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms