Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SMARCD3Q6STE5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMARCD3Q6STE5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMARCD3Q6STE5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMARCD3Q6STE5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SMARCD3Q6STE5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 TSEN15P1-201ENST00000423257 515 ntBASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 KLF2P3-201ENST00000451977 1087 ntBASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 AC004066.1-201ENST00000502488 802 ntBASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SMARCD3Q6STE5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 AP001267.2-201ENST00000532619 2086 ntBASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 AC027601.5-201ENST00000624065 2482 ntBASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 ZNF890P-202ENST00000530367 1156 ntBASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 AC044860.1-202ENST00000559481 777 ntBASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 AC025678.2-201ENST00000562061 970 ntBASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 AC140878.1-201ENST00000565277 250 ntBASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMARCD3Q6STE5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms