Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 AC092570.1-201ENST00000414446 469 ntBASIC14.34□□□□□ -0.11
RIF1Q5UIP0 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 KRT18P46-201ENST00000435568 1279 ntBASIC14.34□□□□□ -0.11
RIF1Q5UIP0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 PEBP1P3-201ENST00000455475 548 ntBASIC14.34□□□□□ -0.11
RIF1Q5UIP0 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 EEF1DP7-201ENST00000580496 513 ntBASIC14.34□□□□□ -0.11
RIF1Q5UIP0 NEK4P3-201ENST00000604859 544 ntBASIC14.34□□□□□ -0.11
RIF1Q5UIP0 COQ4-204ENST00000608951 781 ntTSL 2 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RIF1Q5UIP0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.33□□□□□ -0.11
RIF1Q5UIP0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RIF1Q5UIP0 AC092127.1-201ENST00000567093 3455 ntBASIC14.33□□□□□ -0.11
RIF1Q5UIP0 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
RIF1Q5UIP0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.33□□□□□ -0.11
RIF1Q5UIP0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.33□□□□□ -0.11
RIF1Q5UIP0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RIF1Q5UIP0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RIF1Q5UIP0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RIF1Q5UIP0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.33□□□□□ -0.11
RIF1Q5UIP0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 GUSBP10-201ENST00000417412 665 ntBASIC14.33□□□□□ -0.12
RIF1Q5UIP0 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 AC006529.1-201ENST00000459978 637 ntBASIC14.33□□□□□ -0.12
RIF1Q5UIP0 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 SIGLEC20P-201ENST00000595243 1311 ntBASIC14.33□□□□□ -0.12
RIF1Q5UIP0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 IGHV1-12-201ENST00000518307 205 ntBASIC14.33□□□□□ -0.12
RIF1Q5UIP0 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.33□□□□□ -0.12
RIF1Q5UIP0 MIR4640-201ENST00000581824 90 ntBASIC14.33□□□□□ -0.12
RIF1Q5UIP0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RIF1Q5UIP0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 RBPMSLP-201ENST00000433427 502 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 MIR6720-201ENST00000611664 98 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 AC009145.4-201ENST00000625119 1294 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 AHCYP4-201ENST00000419201 1315 ntBASIC14.32□□□□□ -0.12
RIF1Q5UIP0 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
RIF1Q5UIP0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms