Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 AC136604.1-202ENST00000425471 771 ntBASIC12.79□□□□□ -0.36
LRRK2Q5S007 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 RN7SKP230-201ENST00000365642 335 ntBASIC12.79□□□□□ -0.36
LRRK2Q5S007 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 AL450487.2-201ENST00000615934 407 ntBASIC12.79□□□□□ -0.36
LRRK2Q5S007 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LRRK2Q5S007 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LRRK2Q5S007 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 AC124067.4-201ENST00000519691 2379 ntBASIC12.78□□□□□ -0.36
LRRK2Q5S007 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 CASP3-205ENST00000517513 964 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 LY6E-215ENST00000523847 427 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 URB1-AS1-201ENST00000534991 831 ntBASIC12.78□□□□□ -0.36
LRRK2Q5S007 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 AC027601.3-201ENST00000622907 509 ntBASIC12.78□□□□□ -0.36
LRRK2Q5S007 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 AC005332.8-201ENST00000622750 2735 ntBASIC12.78□□□□□ -0.36
LRRK2Q5S007 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 REXO1L4P-201ENST00000605109 1937 ntBASIC12.78□□□□□ -0.36
LRRK2Q5S007 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LRRK2Q5S007 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.78□□□□□ -0.36
LRRK2Q5S007 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.78□□□□□ -0.36
LRRK2Q5S007 FBXO36P1-201ENST00000579006 471 ntBASIC12.78□□□□□ -0.36
LRRK2Q5S007 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms