Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
DCAF4L1Q3SXM0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DCAF4L1Q3SXM0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
DCAF4L1Q3SXM0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
DCAF4L1Q3SXM0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 MIR1247-201ENST00000408206 136 ntBASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 AP001258.2-201ENST00000529891 490 ntBASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 BX088702.1-201ENST00000610784 235 ntBASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 MIR6787-201ENST00000616675 61 ntBASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
DCAF4L1Q3SXM0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.21■□□□□ 0.18
DCAF4L1Q3SXM0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
DCAF4L1Q3SXM0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
DCAF4L1Q3SXM0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
DCAF4L1Q3SXM0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.21■□□□□ 0.18
DCAF4L1Q3SXM0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 KRT8P13-201ENST00000463294 1010 ntBASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 AC007663.3-201ENST00000609632 465 ntBASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 AC244093.1-201ENST00000610837 814 ntBASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 GPR182-203ENST00000622922 591 ntBASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DCAF4L1Q3SXM0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 LINC01101-201ENST00000622953 1884 ntBASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.19■□□□□ 0.18
DCAF4L1Q3SXM0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms