Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.85■□□□□ 0.29
ASIC1P78348 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 AL162726.2-201ENST00000438986 1017 ntBASIC16.85■□□□□ 0.29
ASIC1P78348 AC114812.1-204ENST00000449669 728 ntBASIC16.85■□□□□ 0.29
ASIC1P78348 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ASIC1P78348 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ASIC1P78348 AC022616.1-201ENST00000518688 554 ntBASIC16.85■□□□□ 0.29
ASIC1P78348 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
ASIC1P78348 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.85■□□□□ 0.29
ASIC1P78348 MIR3197-201ENST00000582241 73 ntBASIC16.85■□□□□ 0.29
ASIC1P78348 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 AC018665.1-201ENST00000622927 1362 ntBASIC16.85■□□□□ 0.29
ASIC1P78348 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ASIC1P78348 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ASIC1P78348 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.84■□□□□ 0.29
ASIC1P78348 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.84■□□□□ 0.29
ASIC1P78348 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ASIC1P78348 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ASIC1P78348 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
ASIC1P78348 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ASIC1P78348 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ASIC1P78348 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
ASIC1P78348 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.84■□□□□ 0.29
ASIC1P78348 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.84■□□□□ 0.29
ASIC1P78348 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.84■□□□□ 0.29
ASIC1P78348 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.84■□□□□ 0.29
ASIC1P78348 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.84■□□□□ 0.29
ASIC1P78348 DUX4L47-201ENST00000566374 394 ntBASIC16.84■□□□□ 0.29
ASIC1P78348 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ASIC1P78348 CLUHP6-201ENST00000580789 941 ntBASIC16.84■□□□□ 0.29
ASIC1P78348 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.84■□□□□ 0.29
ASIC1P78348 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.84■□□□□ 0.29
ASIC1P78348 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ASIC1P78348 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ASIC1P78348 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ASIC1P78348 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.84■□□□□ 0.29
ASIC1P78348 AC007326.2-201ENST00000624224 7579 ntBASIC16.84■□□□□ 0.29
ASIC1P78348 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.84■□□□□ 0.29
ASIC1P78348 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.84■□□□□ 0.29
ASIC1P78348 AC055811.4-201ENST00000624039 1754 ntBASIC16.84■□□□□ 0.29
ASIC1P78348 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ASIC1P78348 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
ASIC1P78348 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ASIC1P78348 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.83■□□□□ 0.29
ASIC1P78348 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
ASIC1P78348 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
ASIC1P78348 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ASIC1P78348 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ASIC1P78348 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ASIC1P78348 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.83■□□□□ 0.28
ASIC1P78348 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.83■□□□□ 0.28
ASIC1P78348 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ASIC1P78348 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ASIC1P78348 ENPP7P5-201ENST00000541031 1031 ntBASIC16.83■□□□□ 0.28
ASIC1P78348 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.83■□□□□ 0.28
ASIC1P78348 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.83■□□□□ 0.28
ASIC1P78348 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.83■□□□□ 0.28
ASIC1P78348 TP53TG3HP-202ENST00000569755 579 ntBASIC16.83■□□□□ 0.28
ASIC1P78348 LRRC59-203ENST00000576448 1531 ntBASIC16.83■□□□□ 0.28
ASIC1P78348 AP005019.2-201ENST00000615104 511 ntBASIC16.83■□□□□ 0.28
ASIC1P78348 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ASIC1P78348 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
ASIC1P78348 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ASIC1P78348 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ASIC1P78348 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms