Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP54P61011 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.9□□□□□ -0.02
SRP54P61011 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
SRP54P61011 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SRP54P61011 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRP54P61011 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.9□□□□□ -0.02
SRP54P61011 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 AC243960.2-201ENST00000600996 747 ntBASIC14.9□□□□□ -0.02
SRP54P61011 OR10B1P-201ENST00000601666 907 ntBASIC14.9□□□□□ -0.02
SRP54P61011 MIR6787-201ENST00000616675 61 ntBASIC14.9□□□□□ -0.02
SRP54P61011 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.9□□□□□ -0.02
SRP54P61011 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SRP54P61011 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP54P61011 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 AC015818.8-201ENST00000587907 1519 ntBASIC14.9□□□□□ -0.02
SRP54P61011 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP54P61011 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.9□□□□□ -0.02
SRP54P61011 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.9□□□□□ -0.02
SRP54P61011 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SRP54P61011 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SRP54P61011 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SRP54P61011 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SRP54P61011 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.89□□□□□ -0.03
SRP54P61011 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SRP54P61011 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.89□□□□□ -0.03
SRP54P61011 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SRP54P61011 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.89□□□□□ -0.03
SRP54P61011 AL118558.3-201ENST00000607414 1079 ntBASIC14.89□□□□□ -0.03
SRP54P61011 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.89□□□□□ -0.03
SRP54P61011 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.89□□□□□ -0.03
SRP54P61011 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.89□□□□□ -0.03
SRP54P61011 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.89□□□□□ -0.03
SRP54P61011 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SRP54P61011 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SRP54P61011 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.89□□□□□ -0.03
SRP54P61011 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SRP54P61011 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SRP54P61011 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SRP54P61011 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.88□□□□□ -0.03
SRP54P61011 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP54P61011 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SRP54P61011 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.88□□□□□ -0.03
SRP54P61011 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP54P61011 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SRP54P61011 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms