Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MTDHP5-201ENST00000598980 586 ntBASIC12.37□□□□□ -0.43
SPCS3P61009 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 AC007787.1-201ENST00000588095 1583 ntBASIC12.37□□□□□ -0.43
SPCS3P61009 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SPCS3P61009 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 REXO1L4P-201ENST00000605109 1937 ntBASIC12.37□□□□□ -0.43
SPCS3P61009 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SPCS3P61009 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.37□□□□□ -0.43
SPCS3P61009 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.37□□□□□ -0.43
SPCS3P61009 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPCS3P61009 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 AC015909.5-201ENST00000624336 2266 ntBASIC12.36□□□□□ -0.43
SPCS3P61009 AC018442.1-201ENST00000421439 2061 ntBASIC12.36□□□□□ -0.43
SPCS3P61009 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SPCS3P61009 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.36□□□□□ -0.43
SPCS3P61009 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.36□□□□□ -0.43
SPCS3P61009 MTND6P24-201ENST00000440466 518 ntBASIC12.36□□□□□ -0.43
SPCS3P61009 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
SPCS3P61009 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.36□□□□□ -0.43
SPCS3P61009 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.36□□□□□ -0.43
SPCS3P61009 AC022145.2-201ENST00000598203 171 ntBASIC12.36□□□□□ -0.43
SPCS3P61009 AC025181.2-201ENST00000606994 802 ntBASIC12.36□□□□□ -0.43
SPCS3P61009 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SPCS3P61009 AC105339.1-204ENST00000636249 355 ntBASIC12.36□□□□□ -0.43
SPCS3P61009 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SPCS3P61009 Z97205.2-201ENST00000564697 1639 ntBASIC12.36□□□□□ -0.43
SPCS3P61009 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SPCS3P61009 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SPCS3P61009 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.36□□□□□ -0.43
SPCS3P61009 AL731571.1-201ENST00000617058 5428 ntBASIC12.36□□□□□ -0.43
SPCS3P61009 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SPCS3P61009 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 TRIM80P-201ENST00000455685 2848 ntBASIC12.35□□□□□ -0.43
SPCS3P61009 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.35□□□□□ -0.43
SPCS3P61009 AC138969.3-201ENST00000546612 1459 ntBASIC12.35□□□□□ -0.43
SPCS3P61009 AC138932.2-201ENST00000548268 1459 ntBASIC12.35□□□□□ -0.43
SPCS3P61009 AC126755.4-201ENST00000549796 1459 ntBASIC12.35□□□□□ -0.43
SPCS3P61009 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 AC018529.2-202ENST00000611482 3087 ntBASIC12.35□□□□□ -0.43
SPCS3P61009 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SPCS3P61009 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPCS3P61009 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.35□□□□□ -0.43
SPCS3P61009 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SPCS3P61009 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms