Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 WFDC1-204ENST00000613603 549 ntBASIC15.71■□□□□ 0.11
CDH6P55285 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH6P55285 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDH6P55285 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH6P55285 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH6P55285 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH6P55285 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CDH6P55285 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH6P55285 AC018665.1-201ENST00000622927 1362 ntBASIC15.71■□□□□ 0.11
CDH6P55285 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH6P55285 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH6P55285 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH6P55285 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.71■□□□□ 0.1
CDH6P55285 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
CDH6P55285 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
CDH6P55285 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.71■□□□□ 0.1
CDH6P55285 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
CDH6P55285 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.71■□□□□ 0.1
CDH6P55285 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CDH6P55285 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDH6P55285 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH6P55285 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDH6P55285 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH6P55285 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH6P55285 AC022616.1-201ENST00000518688 554 ntBASIC15.7■□□□□ 0.1
CDH6P55285 ENPP7P5-201ENST00000541031 1031 ntBASIC15.7■□□□□ 0.1
CDH6P55285 DUX4L47-201ENST00000566374 394 ntBASIC15.7■□□□□ 0.1
CDH6P55285 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH6P55285 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDH6P55285 CU634019.7-201ENST00000624153 1185 ntBASIC15.7■□□□□ 0.1
CDH6P55285 FP236241.2-201ENST00000624906 1185 ntBASIC15.7■□□□□ 0.1
CDH6P55285 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDH6P55285 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDH6P55285 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDH6P55285 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDH6P55285 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CDH6P55285 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDH6P55285 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH6P55285 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDH6P55285 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH6P55285 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDH6P55285 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH6P55285 AC007191.1-201ENST00000623179 2995 ntBASIC15.69■□□□□ 0.1
CDH6P55285 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH6P55285 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CDH6P55285 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDH6P55285 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDH6P55285 AC113367.3-201ENST00000508316 1912 ntBASIC15.69■□□□□ 0.1
CDH6P55285 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH6P55285 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDH6P55285 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDH6P55285 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH6P55285 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH6P55285 AL162726.2-201ENST00000438986 1017 ntBASIC15.69■□□□□ 0.1
CDH6P55285 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH6P55285 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.69■□□□□ 0.1
CDH6P55285 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH6P55285 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 CLUHP6-201ENST00000580789 941 ntBASIC15.69■□□□□ 0.1
CDH6P55285 MIR3197-201ENST00000582241 73 ntBASIC15.69■□□□□ 0.1
CDH6P55285 AC138761.1-201ENST00000584393 385 ntBASIC15.69■□□□□ 0.1
CDH6P55285 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH6P55285 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH6P55285 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH6P55285 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDH6P55285 AP005019.2-201ENST00000615104 511 ntBASIC15.69■□□□□ 0.1
CDH6P55285 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH6P55285 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.69■□□□□ 0.1
CDH6P55285 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH6P55285 AC055811.4-201ENST00000624039 1754 ntBASIC15.69■□□□□ 0.1
CDH6P55285 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH6P55285 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms