Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
APOC4P55056 C18orf15-201ENST00000623680 2534 ntBASIC11.04□□□□□ -0.64
APOC4P55056 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.04□□□□□ -0.64
APOC4P55056 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 FKBP4P6-201ENST00000457486 1332 ntBASIC11.04□□□□□ -0.64
APOC4P55056 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.04□□□□□ -0.64
APOC4P55056 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
APOC4P55056 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.04□□□□□ -0.64
APOC4P55056 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 KRT8P44-201ENST00000441609 1350 ntBASIC11.03□□□□□ -0.64
APOC4P55056 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 AC023024.2-201ENST00000623561 1993 ntBASIC11.03□□□□□ -0.64
APOC4P55056 AL157414.3-201ENST00000624276 1954 ntBASIC11.03□□□□□ -0.64
APOC4P55056 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
APOC4P55056 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.03□□□□□ -0.64
APOC4P55056 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 AL136309.1-201ENST00000403917 691 ntBASIC11.03□□□□□ -0.64
APOC4P55056 MIR1908-201ENST00000410394 80 ntBASIC11.03□□□□□ -0.64
APOC4P55056 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC11.03□□□□□ -0.64
APOC4P55056 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 MESTP3-201ENST00000503460 968 ntBASIC11.03□□□□□ -0.64
APOC4P55056 AC026434.2-201ENST00000506094 1078 ntBASIC11.03□□□□□ -0.64
APOC4P55056 FAM86HP-204ENST00000513466 959 ntBASIC11.03□□□□□ -0.64
APOC4P55056 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.03□□□□□ -0.64
APOC4P55056 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
APOC4P55056 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
APOC4P55056 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC11.03□□□□□ -0.64
APOC4P55056 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.03□□□□□ -0.64
APOC4P55056 AC243960.2-201ENST00000600996 747 ntBASIC11.03□□□□□ -0.64
APOC4P55056 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
APOC4P55056 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.03□□□□□ -0.64
APOC4P55056 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
APOC4P55056 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
APOC4P55056 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.03□□□□□ -0.64
APOC4P55056 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.03□□□□□ -0.64
APOC4P55056 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
APOC4P55056 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
APOC4P55056 LILRP1-201ENST00000444199 1370 ntBASIC11.03□□□□□ -0.64
APOC4P55056 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.02□□□□□ -0.64
APOC4P55056 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC4P55056 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC4P55056 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
APOC4P55056 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.02□□□□□ -0.64
APOC4P55056 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
APOC4P55056 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC4P55056 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.02□□□□□ -0.64
APOC4P55056 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC4P55056 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
APOC4P55056 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms