Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 AC138466.3-201ENST00000619983 221 ntBASIC18.33■□□□□ 0.52
PDE1AP54750 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE1AP54750 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.33■□□□□ 0.52
PDE1AP54750 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 AC015656.1-201ENST00000624209 3578 ntBASIC18.33■□□□□ 0.52
PDE1AP54750 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 AC011840.2-201ENST00000563063 1520 ntBASIC18.33■□□□□ 0.52
PDE1AP54750 AC020910.5-201ENST00000623668 1865 ntBASIC18.33■□□□□ 0.52
PDE1AP54750 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDE1AP54750 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 AGGF1P1-201ENST00000509500 2073 ntBASIC18.32■□□□□ 0.52
PDE1AP54750 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDE1AP54750 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.32■□□□□ 0.52
PDE1AP54750 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.32■□□□□ 0.52
PDE1AP54750 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.32■□□□□ 0.52
PDE1AP54750 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.32■□□□□ 0.52
PDE1AP54750 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.32■□□□□ 0.52
PDE1AP54750 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.32■□□□□ 0.52
PDE1AP54750 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.32■□□□□ 0.52
PDE1AP54750 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDE1AP54750 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.32■□□□□ 0.52
PDE1AP54750 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDE1AP54750 CU639417.3-201ENST00000624240 1404 ntBASIC18.32■□□□□ 0.52
PDE1AP54750 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE1AP54750 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PDE1AP54750 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.31■□□□□ 0.52
PDE1AP54750 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PDE1AP54750 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE1AP54750 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE1AP54750 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDE1AP54750 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PDE1AP54750 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.31■□□□□ 0.52
PDE1AP54750 NME2P1-201ENST00000426182 414 ntBASIC18.31■□□□□ 0.52
PDE1AP54750 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDE1AP54750 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDE1AP54750 TTTY23B-201ENST00000442790 549 ntBASIC18.31■□□□□ 0.52
PDE1AP54750 AL355864.2-201ENST00000447420 863 ntBASIC18.31■□□□□ 0.52
PDE1AP54750 BCRP2-202ENST00000447763 634 ntBASIC18.31■□□□□ 0.52
PDE1AP54750 AL391280.1-201ENST00000506969 1062 ntBASIC18.31■□□□□ 0.52
PDE1AP54750 BCRP6-201ENST00000510112 632 ntBASIC18.31■□□□□ 0.52
PDE1AP54750 BCRP7-201ENST00000511549 544 ntBASIC18.31■□□□□ 0.52
PDE1AP54750 AC022447.6-201ENST00000515522 438 ntBASIC18.31■□□□□ 0.52
PDE1AP54750 AC132938.4-201ENST00000623835 848 ntBASIC18.31■□□□□ 0.52
PDE1AP54750 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
PDE1AP54750 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PDE1AP54750 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
PDE1AP54750 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDE1AP54750 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PDE1AP54750 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PDE1AP54750 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.3■□□□□ 0.52
PDE1AP54750 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDE1AP54750 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms