Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.4□□□□□ -0.26
SLC25A1P53007 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC25A1P53007 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC25A1P53007 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SLC25A1P53007 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.4□□□□□ -0.26
SLC25A1P53007 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.4□□□□□ -0.26
SLC25A1P53007 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SLC25A1P53007 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SLC25A1P53007 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SLC25A1P53007 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 KRT18P28-201ENST00000453838 1332 ntBASIC13.39□□□□□ -0.27
SLC25A1P53007 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC25A1P53007 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 AL928921.2-201ENST00000641325 2442 ntBASIC13.39□□□□□ -0.27
SLC25A1P53007 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SLC25A1P53007 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC25A1P53007 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.39□□□□□ -0.27
SLC25A1P53007 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SLC25A1P53007 TLE1P1-201ENST00000422965 589 ntBASIC13.39□□□□□ -0.27
SLC25A1P53007 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.39□□□□□ -0.27
SLC25A1P53007 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.39□□□□□ -0.27
SLC25A1P53007 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.39□□□□□ -0.27
SLC25A1P53007 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.39□□□□□ -0.27
SLC25A1P53007 AC092364.2-202ENST00000597012 1073 ntBASIC13.39□□□□□ -0.27
SLC25A1P53007 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.39□□□□□ -0.27
SLC25A1P53007 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.39□□□□□ -0.27
SLC25A1P53007 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
SLC25A1P53007 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC25A1P53007 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC25A1P53007 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC25A1P53007 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 AL359881.3-201ENST00000602640 1721 ntBASIC13.39□□□□□ -0.27
SLC25A1P53007 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC25A1P53007 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC25A1P53007 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.38□□□□□ -0.27
SLC25A1P53007 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC25A1P53007 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC25A1P53007 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
SLC25A1P53007 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SLC25A1P53007 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC25A1P53007 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC25A1P53007 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC25A1P53007 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC25A1P53007 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 AC134915.1-201ENST00000426461 574 ntBASIC13.38□□□□□ -0.27
SLC25A1P53007 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.38□□□□□ -0.27
SLC25A1P53007 METTL21AP1-201ENST00000438852 635 ntBASIC13.38□□□□□ -0.27
SLC25A1P53007 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.38□□□□□ -0.27
SLC25A1P53007 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.38□□□□□ -0.27
SLC25A1P53007 AL512638.1-201ENST00000457493 794 ntBASIC13.38□□□□□ -0.27
SLC25A1P53007 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.38□□□□□ -0.27
SLC25A1P53007 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.38□□□□□ -0.27
SLC25A1P53007 AC099568.2-201ENST00000609194 695 ntBASIC13.38□□□□□ -0.27
SLC25A1P53007 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.38□□□□□ -0.27
SLC25A1P53007 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SLC25A1P53007 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLC25A1P53007 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms