Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLCN3P51790 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLCN3P51790 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
CLCN3P51790 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLCN3P51790 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCN3P51790 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CLCN3P51790 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
CLCN3P51790 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CLCN3P51790 TLE1P1-201ENST00000422965 589 ntBASIC16.45■□□□□ 0.22
CLCN3P51790 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCN3P51790 AC005077.2-201ENST00000449786 690 ntBASIC16.45■□□□□ 0.22
CLCN3P51790 EIF4HP1-201ENST00000453115 687 ntBASIC16.45■□□□□ 0.22
CLCN3P51790 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCN3P51790 AC100827.2-201ENST00000563214 1194 ntBASIC16.45■□□□□ 0.22
CLCN3P51790 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCN3P51790 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CLCN3P51790 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.45■□□□□ 0.22
CLCN3P51790 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CLCN3P51790 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CLCN3P51790 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN3P51790 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.44■□□□□ 0.22
CLCN3P51790 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.44■□□□□ 0.22
CLCN3P51790 AC013726.1-201ENST00000563747 2285 ntBASIC16.44■□□□□ 0.22
CLCN3P51790 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN3P51790 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.44■□□□□ 0.22
CLCN3P51790 AC016700.1-201ENST00000429424 312 ntBASIC16.44■□□□□ 0.22
CLCN3P51790 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN3P51790 IGHJ2P-201ENST00000454480 60 ntBASIC16.44■□□□□ 0.22
CLCN3P51790 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN3P51790 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.44■□□□□ 0.22
CLCN3P51790 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.44■□□□□ 0.22
CLCN3P51790 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.44■□□□□ 0.22
CLCN3P51790 DUX4L46-201ENST00000566845 751 ntBASIC16.44■□□□□ 0.22
CLCN3P51790 AL023803.2-201ENST00000620080 638 ntBASIC16.44■□□□□ 0.22
CLCN3P51790 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 ZBED1P1-201ENST00000502364 1930 ntBASIC16.44■□□□□ 0.22
CLCN3P51790 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLCN3P51790 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN3P51790 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLCN3P51790 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.44■□□□□ 0.22
CLCN3P51790 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLCN3P51790 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CLCN3P51790 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLCN3P51790 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 AC006058.4-201ENST00000624016 1670 ntBASIC16.43■□□□□ 0.22
CLCN3P51790 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLCN3P51790 AC006486.2-201ENST00000624246 2199 ntBASIC16.43■□□□□ 0.22
CLCN3P51790 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLCN3P51790 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLCN3P51790 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 AC022532.1-201ENST00000624563 1728 ntBASIC16.43■□□□□ 0.22
CLCN3P51790 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLCN3P51790 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLCN3P51790 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms