Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCN2P51788 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCN2P51788 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLCN2P51788 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLCN2P51788 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 AL589987.1-201ENST00000453380 819 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 SLED1-202ENST00000512051 380 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.68□□□□□ -0.06
CLCN2P51788 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.68□□□□□ -0.06
CLCN2P51788 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 AC023310.3-201ENST00000557027 670 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 AC100756.1-201ENST00000562736 682 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 AC138749.3-201ENST00000567691 622 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 AC140912.1-201ENST00000577171 1054 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 SPDYE22P-201ENST00000582158 798 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.68□□□□□ -0.06
CLCN2P51788 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 AC116165.1-201ENST00000611806 668 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 AC004790.1-201ENST00000612686 536 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 AL358472.5-202ENST00000641448 1267 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 SLC7A15P-201ENST00000424028 1363 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLCN2P51788 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLCN2P51788 COL6A4P2-202ENST00000504443 2753 ntBASIC14.68□□□□□ -0.06
CLCN2P51788 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCN2P51788 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.67□□□□□ -0.06
CLCN2P51788 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.67□□□□□ -0.06
CLCN2P51788 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CLCN2P51788 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.67□□□□□ -0.06
CLCN2P51788 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLCN2P51788 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.67□□□□□ -0.06
CLCN2P51788 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CLCN2P51788 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CLCN2P51788 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 AC004945.1-201ENST00000416738 983 ntBASIC14.67□□□□□ -0.06
CLCN2P51788 AC074338.1-201ENST00000416825 156 ntBASIC14.67□□□□□ -0.06
CLCN2P51788 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.67□□□□□ -0.06
CLCN2P51788 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.67□□□□□ -0.06
CLCN2P51788 RPL13P2-201ENST00000440687 659 ntBASIC14.67□□□□□ -0.06
CLCN2P51788 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCN2P51788 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.67□□□□□ -0.06
CLCN2P51788 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.67□□□□□ -0.06
CLCN2P51788 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms