Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSR4P51571 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSR4P51571 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSR4P51571 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSR4P51571 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSR4P51571 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSR4P51571 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SSR4P51571 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.79□□□□□ -0.2
SSR4P51571 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SSR4P51571 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSR4P51571 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.79□□□□□ -0.2
SSR4P51571 AC011840.2-201ENST00000563063 1520 ntBASIC13.79□□□□□ -0.2
SSR4P51571 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SSR4P51571 TSPY26P-202ENST00000565928 3884 ntBASIC13.79□□□□□ -0.2
SSR4P51571 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SSR4P51571 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SSR4P51571 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.78□□□□□ -0.2
SSR4P51571 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.78□□□□□ -0.2
SSR4P51571 ZBED1P1-201ENST00000502364 1930 ntBASIC13.78□□□□□ -0.2
SSR4P51571 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.78□□□□□ -0.2
SSR4P51571 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 AC023090.2-201ENST00000625182 2110 ntBASIC13.78□□□□□ -0.2
SSR4P51571 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.78□□□□□ -0.2
SSR4P51571 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
SSR4P51571 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.78□□□□□ -0.2
SSR4P51571 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SSR4P51571 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.78□□□□□ -0.2
SSR4P51571 HIST2H2BB-201ENST00000449108 381 ntBASIC13.78□□□□□ -0.2
SSR4P51571 FAM8A2P-201ENST00000528813 1142 ntBASIC13.78□□□□□ -0.2
SSR4P51571 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
SSR4P51571 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.78□□□□□ -0.2
SSR4P51571 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.78□□□□□ -0.2
SSR4P51571 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.78□□□□□ -0.2
SSR4P51571 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.78□□□□□ -0.2
SSR4P51571 AC002472.3-201ENST00000640124 621 ntBASIC13.78□□□□□ -0.2
SSR4P51571 AL138725.1-201ENST00000407347 1314 ntBASIC13.78□□□□□ -0.2
SSR4P51571 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SSR4P51571 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.78□□□□□ -0.2
SSR4P51571 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.78□□□□□ -0.2
SSR4P51571 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SSR4P51571 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SSR4P51571 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.78□□□□□ -0.2
SSR4P51571 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SSR4P51571 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SSR4P51571 AC097376.2-205ENST00000610159 5334 ntBASIC13.77□□□□□ -0.2
SSR4P51571 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSR4P51571 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSR4P51571 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.77□□□□□ -0.2
SSR4P51571 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSR4P51571 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SSR4P51571 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.2
SSR4P51571 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
SSR4P51571 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SSR4P51571 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.77□□□□□ -0.21
SSR4P51571 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SSR4P51571 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.77□□□□□ -0.21
SSR4P51571 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.77□□□□□ -0.21
SSR4P51571 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.77□□□□□ -0.21
SSR4P51571 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.77□□□□□ -0.21
SSR4P51571 SALL4P5-201ENST00000419001 1760 ntBASIC13.77□□□□□ -0.21
SSR4P51571 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.77□□□□□ -0.21
SSR4P51571 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.77□□□□□ -0.21
SSR4P51571 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.77□□□□□ -0.21
SSR4P51571 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.77□□□□□ -0.21
SSR4P51571 CHMP1AP1-201ENST00000445563 662 ntBASIC13.77□□□□□ -0.21
SSR4P51571 AL591846.1-201ENST00000451736 433 ntBASIC13.77□□□□□ -0.21
SSR4P51571 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SSR4P51571 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms