Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLK1P49759 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.27□□□□□ -0.12
CLK1P49759 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.27□□□□□ -0.12
CLK1P49759 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLK1P49759 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.27□□□□□ -0.12
CLK1P49759 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CLK1P49759 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLK1P49759 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
CLK1P49759 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.27□□□□□ -0.12
CLK1P49759 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLK1P49759 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLK1P49759 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLK1P49759 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.27□□□□□ -0.12
CLK1P49759 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLK1P49759 BTBD7P1-201ENST00000447253 1453 ntBASIC14.27□□□□□ -0.12
CLK1P49759 AC100757.3-201ENST00000622361 1406 ntBASIC14.27□□□□□ -0.12
CLK1P49759 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.27□□□□□ -0.13
CLK1P49759 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.27□□□□□ -0.13
CLK1P49759 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLK1P49759 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.27□□□□□ -0.13
CLK1P49759 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.27□□□□□ -0.13
CLK1P49759 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.27□□□□□ -0.13
CLK1P49759 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.27□□□□□ -0.13
CLK1P49759 RFPL4AP1-201ENST00000530883 850 ntBASIC14.27□□□□□ -0.13
CLK1P49759 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 DUX4L27-201ENST00000554796 1261 ntBASIC14.27□□□□□ -0.13
CLK1P49759 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.27□□□□□ -0.13
CLK1P49759 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CLK1P49759 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.27□□□□□ -0.13
CLK1P49759 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.27□□□□□ -0.13
CLK1P49759 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.27□□□□□ -0.13
CLK1P49759 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CLK1P49759 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CLK1P49759 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CLK1P49759 AC136759.1-202ENST00000530858 2194 ntBASIC14.27□□□□□ -0.13
CLK1P49759 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.27□□□□□ -0.13
CLK1P49759 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.27□□□□□ -0.13
CLK1P49759 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 BX640514.1-201ENST00000583223 1918 ntBASIC14.27□□□□□ -0.13
CLK1P49759 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.27□□□□□ -0.13
CLK1P49759 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.27□□□□□ -0.13
CLK1P49759 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.27□□□□□ -0.13
CLK1P49759 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLK1P49759 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLK1P49759 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 CR383656.2-201ENST00000548656 2254 ntBASIC14.26□□□□□ -0.13
CLK1P49759 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.26□□□□□ -0.13
CLK1P49759 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLK1P49759 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLK1P49759 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.26□□□□□ -0.13
CLK1P49759 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
CLK1P49759 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.26□□□□□ -0.13
CLK1P49759 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.26□□□□□ -0.13
CLK1P49759 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.26□□□□□ -0.13
CLK1P49759 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.26□□□□□ -0.13
CLK1P49759 AC010336.2-201ENST00000564226 506 ntBASIC14.26□□□□□ -0.13
CLK1P49759 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.26□□□□□ -0.13
CLK1P49759 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.26□□□□□ -0.13
CLK1P49759 AC025048.3-201ENST00000590609 569 ntBASIC14.26□□□□□ -0.13
CLK1P49759 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CLK1P49759 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.26□□□□□ -0.13
CLK1P49759 AC005702.4-201ENST00000618393 416 ntBASIC14.26□□□□□ -0.13
CLK1P49759 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.26□□□□□ -0.13
CLK1P49759 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLK1P49759 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLK1P49759 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms