Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SRP9P49458 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.47□□□□□ -0.25
SRP9P49458 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
SRP9P49458 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SRP9P49458 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.46□□□□□ -0.25
SRP9P49458 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.46□□□□□ -0.25
SRP9P49458 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SRP9P49458 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.46□□□□□ -0.25
SRP9P49458 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SRP9P49458 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.46□□□□□ -0.25
SRP9P49458 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SRP9P49458 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.46□□□□□ -0.25
SRP9P49458 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.46□□□□□ -0.25
SRP9P49458 TSSK5P-201ENST00000423978 907 ntBASIC13.46□□□□□ -0.25
SRP9P49458 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.46□□□□□ -0.25
SRP9P49458 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.46□□□□□ -0.25
SRP9P49458 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.46□□□□□ -0.25
SRP9P49458 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.46□□□□□ -0.25
SRP9P49458 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.46□□□□□ -0.25
SRP9P49458 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.46□□□□□ -0.25
SRP9P49458 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.46□□□□□ -0.25
SRP9P49458 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.46□□□□□ -0.25
SRP9P49458 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.46□□□□□ -0.25
SRP9P49458 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.46□□□□□ -0.25
SRP9P49458 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.46□□□□□ -0.25
SRP9P49458 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SRP9P49458 AL844908.2-201ENST00000609461 460 ntBASIC13.46□□□□□ -0.25
SRP9P49458 AC074044.1-201ENST00000609673 707 ntBASIC13.46□□□□□ -0.25
SRP9P49458 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SRP9P49458 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SRP9P49458 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.46□□□□□ -0.25
SRP9P49458 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SRP9P49458 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.46□□□□□ -0.26
SRP9P49458 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SRP9P49458 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SRP9P49458 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SRP9P49458 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SRP9P49458 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SRP9P49458 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SRP9P49458 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.46□□□□□ -0.26
SRP9P49458 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SRP9P49458 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.46□□□□□ -0.26
SRP9P49458 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.46□□□□□ -0.26
SRP9P49458 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SRP9P49458 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.46□□□□□ -0.26
SRP9P49458 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SRP9P49458 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SRP9P49458 WASH3P-207ENST00000560956 1394 ntBASIC13.45□□□□□ -0.26
SRP9P49458 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.45□□□□□ -0.26
SRP9P49458 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.45□□□□□ -0.26
SRP9P49458 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SRP9P49458 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.45□□□□□ -0.26
SRP9P49458 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.45□□□□□ -0.26
SRP9P49458 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SRP9P49458 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 AC136604.1-201ENST00000418535 575 ntBASIC13.45□□□□□ -0.26
SRP9P49458 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.45□□□□□ -0.26
SRP9P49458 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.45□□□□□ -0.26
SRP9P49458 AC004890.2-204ENST00000481968 304 ntBASIC13.45□□□□□ -0.26
SRP9P49458 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.45□□□□□ -0.26
SRP9P49458 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.45□□□□□ -0.26
SRP9P49458 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
SRP9P49458 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.45□□□□□ -0.26
SRP9P49458 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
SRP9P49458 AJ011932.1-201ENST00000621707 465 ntBASIC13.45□□□□□ -0.26
SRP9P49458 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.45□□□□□ -0.26
SRP9P49458 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
SRP9P49458 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.45□□□□□ -0.26
SRP9P49458 AC005562.1-201ENST00000583030 3219 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms