Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.31■□□□□ 0.52
TM4SF1P30408 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.31■□□□□ 0.52
TM4SF1P30408 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TM4SF1P30408 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.31■□□□□ 0.52
TM4SF1P30408 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF1P30408 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.31■□□□□ 0.52
TM4SF1P30408 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TM4SF1P30408 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.3■□□□□ 0.52
TM4SF1P30408 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TM4SF1P30408 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.3■□□□□ 0.52
TM4SF1P30408 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.3■□□□□ 0.52
TM4SF1P30408 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TM4SF1P30408 AQP7P5-201ENST00000428759 1049 ntBASIC18.3■□□□□ 0.52
TM4SF1P30408 PSMD4P1-201ENST00000433951 1109 ntBASIC18.3■□□□□ 0.52
TM4SF1P30408 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF1P30408 ST13P19-201ENST00000442505 1124 ntBASIC18.3■□□□□ 0.52
TM4SF1P30408 AQP7P4-201ENST00000447083 1042 ntBASIC18.3■□□□□ 0.52
TM4SF1P30408 AQP7P2-201ENST00000453967 1041 ntBASIC18.3■□□□□ 0.52
TM4SF1P30408 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF1P30408 AC024293.1-201ENST00000467930 498 ntBASIC18.3■□□□□ 0.52
TM4SF1P30408 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.3■□□□□ 0.52
TM4SF1P30408 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF1P30408 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TM4SF1P30408 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.3■□□□□ 0.52
TM4SF1P30408 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF1P30408 AC007250.1-201ENST00000608934 338 ntBASIC18.3■□□□□ 0.52
TM4SF1P30408 AQP7P3-201ENST00000624547 1041 ntBASIC18.3■□□□□ 0.52
TM4SF1P30408 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.3■□□□□ 0.52
TM4SF1P30408 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.3■□□□□ 0.52
TM4SF1P30408 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.3■□□□□ 0.52
TM4SF1P30408 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.3■□□□□ 0.52
TM4SF1P30408 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.3■□□□□ 0.52
TM4SF1P30408 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF1P30408 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TM4SF1P30408 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.3■□□□□ 0.52
TM4SF1P30408 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.29■□□□□ 0.52
TM4SF1P30408 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF1P30408 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 MRPL37P1-201ENST00000592451 1337 ntBASIC18.29■□□□□ 0.52
TM4SF1P30408 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
TM4SF1P30408 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.29■□□□□ 0.52
TM4SF1P30408 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.29■□□□□ 0.52
TM4SF1P30408 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF1P30408 AL512306.1-201ENST00000432698 848 ntBASIC18.29■□□□□ 0.52
TM4SF1P30408 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF1P30408 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.29■□□□□ 0.52
TM4SF1P30408 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.29■□□□□ 0.52
TM4SF1P30408 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF1P30408 AC009093.10-201ENST00000641956 1442 ntBASIC18.29■□□□□ 0.52
TM4SF1P30408 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 HCG11-201ENST00000411553 5696 ntBASIC18.29■□□□□ 0.52
TM4SF1P30408 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF1P30408 AC126365.1-201ENST00000578585 1514 ntBASIC18.28■□□□□ 0.52
TM4SF1P30408 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TM4SF1P30408 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.28■□□□□ 0.52
TM4SF1P30408 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.28■□□□□ 0.52
TM4SF1P30408 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF1P30408 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.28■□□□□ 0.52
TM4SF1P30408 GCSHP3-201ENST00000431120 391 ntBASIC18.28■□□□□ 0.52
TM4SF1P30408 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.28■□□□□ 0.52
TM4SF1P30408 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.28■□□□□ 0.52
TM4SF1P30408 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.28■□□□□ 0.52
TM4SF1P30408 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms