Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 TNRC18P2-201ENST00000417666 2714 ntBASIC13.91□□□□□ -0.18
ABCD3P28288 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ABCD3P28288 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.91□□□□□ -0.18
ABCD3P28288 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ABCD3P28288 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
ABCD3P28288 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.9□□□□□ -0.18
ABCD3P28288 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
ABCD3P28288 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ABCD3P28288 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.9□□□□□ -0.18
ABCD3P28288 AC104989.1-201ENST00000519711 778 ntBASIC13.9□□□□□ -0.18
ABCD3P28288 IGHV3-71-201ENST00000523324 359 ntBASIC13.9□□□□□ -0.18
ABCD3P28288 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.9□□□□□ -0.18
ABCD3P28288 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 SNX29P1-201ENST00000548357 1007 ntBASIC13.9□□□□□ -0.18
ABCD3P28288 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.9□□□□□ -0.18
ABCD3P28288 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.9□□□□□ -0.18
ABCD3P28288 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 AC004466.1-201ENST00000599515 1080 ntBASIC13.9□□□□□ -0.18
ABCD3P28288 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ABCD3P28288 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ABCD3P28288 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ABCD3P28288 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.9□□□□□ -0.18
ABCD3P28288 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCD3P28288 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ABCD3P28288 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
ABCD3P28288 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
ABCD3P28288 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCD3P28288 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCD3P28288 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ABCD3P28288 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ABCD3P28288 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 ANKRD19P-201ENST00000338192 862 ntBASIC13.89□□□□□ -0.19
ABCD3P28288 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.89□□□□□ -0.19
ABCD3P28288 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCD3P28288 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ABCD3P28288 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.89□□□□□ -0.19
ABCD3P28288 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.89□□□□□ -0.19
ABCD3P28288 AC022210.1-201ENST00000449856 793 ntBASIC13.89□□□□□ -0.19
ABCD3P28288 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.89□□□□□ -0.19
ABCD3P28288 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.89□□□□□ -0.19
ABCD3P28288 AC078819.1-201ENST00000547454 765 ntBASIC13.89□□□□□ -0.19
ABCD3P28288 AC012085.1-201ENST00000548270 765 ntBASIC13.89□□□□□ -0.19
ABCD3P28288 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCD3P28288 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCD3P28288 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ABCD3P28288 RHOXF1P1-202ENST00000635473 501 ntBASIC13.89□□□□□ -0.19
ABCD3P28288 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.89□□□□□ -0.19
ABCD3P28288 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ABCD3P28288 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCD3P28288 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCD3P28288 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCD3P28288 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms