Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.93□□□□□ -0.02
VARSP26640 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VARSP26640 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.93□□□□□ -0.02
VARSP26640 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.93□□□□□ -0.02
VARSP26640 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.93□□□□□ -0.02
VARSP26640 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
VARSP26640 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.93□□□□□ -0.02
VARSP26640 TPRX2P-201ENST00000535362 881 ntBASIC14.93□□□□□ -0.02
VARSP26640 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.93□□□□□ -0.02
VARSP26640 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.93□□□□□ -0.02
VARSP26640 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.93□□□□□ -0.02
VARSP26640 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
VARSP26640 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VARSP26640 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VARSP26640 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.93□□□□□ -0.02
VARSP26640 MYO15B-237ENST00000642007 4893 ntBASIC14.93□□□□□ -0.02
VARSP26640 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
VARSP26640 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.93□□□□□ -0.02
VARSP26640 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.93□□□□□ -0.02
VARSP26640 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.93□□□□□ -0.02
VARSP26640 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VARSP26640 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.92□□□□□ -0.02
VARSP26640 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.92□□□□□ -0.02
VARSP26640 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.92□□□□□ -0.02
VARSP26640 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.92□□□□□ -0.02
VARSP26640 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.92□□□□□ -0.02
VARSP26640 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.92□□□□□ -0.02
VARSP26640 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.92□□□□□ -0.02
VARSP26640 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.92□□□□□ -0.02
VARSP26640 RARRES2P5-201ENST00000564013 466 ntBASIC14.92□□□□□ -0.02
VARSP26640 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
VARSP26640 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VARSP26640 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VARSP26640 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.92□□□□□ -0.02
VARSP26640 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VARSP26640 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.92□□□□□ -0.02
VARSP26640 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VARSP26640 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VARSP26640 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.91□□□□□ -0.02
VARSP26640 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VARSP26640 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
VARSP26640 RPS2P32-201ENST00000439199 892 ntBASIC14.91□□□□□ -0.02
VARSP26640 INE1-201ENST00000456273 945 ntBASIC14.91□□□□□ -0.02
VARSP26640 AC022494.1-201ENST00000466044 728 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms