Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.67□□□□□ -0.38
LMO1P25800 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.67□□□□□ -0.38
LMO1P25800 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 MYCLP2-201ENST00000449268 967 ntBASIC12.67□□□□□ -0.38
LMO1P25800 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.67□□□□□ -0.38
LMO1P25800 AC022616.1-201ENST00000518688 554 ntBASIC12.67□□□□□ -0.38
LMO1P25800 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.67□□□□□ -0.38
LMO1P25800 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.67□□□□□ -0.38
LMO1P25800 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.67□□□□□ -0.38
LMO1P25800 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.67□□□□□ -0.38
LMO1P25800 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.67□□□□□ -0.38
LMO1P25800 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 MTHFR-210ENST00000641407 2387 ntBASIC12.67□□□□□ -0.38
LMO1P25800 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.67□□□□□ -0.38
LMO1P25800 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LMO1P25800 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.67□□□□□ -0.38
LMO1P25800 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.66□□□□□ -0.38
LMO1P25800 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 AC113367.3-201ENST00000508316 1912 ntBASIC12.66□□□□□ -0.38
LMO1P25800 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO1P25800 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
LMO1P25800 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.66□□□□□ -0.38
LMO1P25800 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LMO1P25800 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO1P25800 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO1P25800 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.66□□□□□ -0.38
LMO1P25800 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO1P25800 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO1P25800 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LMO1P25800 GIMAP3P-201ENST00000495150 836 ntBASIC12.66□□□□□ -0.38
LMO1P25800 AP001582.1-201ENST00000525856 295 ntBASIC12.66□□□□□ -0.38
LMO1P25800 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
LMO1P25800 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO1P25800 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.66□□□□□ -0.38
LMO1P25800 RN7SL204P-201ENST00000582831 262 ntBASIC12.66□□□□□ -0.38
LMO1P25800 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
LMO1P25800 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.66□□□□□ -0.38
LMO1P25800 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LMO1P25800 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 AC063926.3-201ENST00000624734 5658 ntBASIC12.66□□□□□ -0.38
LMO1P25800 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LMO1P25800 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LMO1P25800 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.66□□□□□ -0.38
LMO1P25800 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LMO1P25800 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms