Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.78□□□□□ -0.2
CD53P19397 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.78□□□□□ -0.2
CD53P19397 MIR6775-201ENST00000617557 69 ntBASIC13.78□□□□□ -0.2
CD53P19397 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.78□□□□□ -0.2
CD53P19397 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.78□□□□□ -0.2
CD53P19397 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CD53P19397 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.78□□□□□ -0.2
CD53P19397 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.78□□□□□ -0.2
CD53P19397 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.78□□□□□ -0.2
CD53P19397 AL136982.4-201ENST00000437689 1740 ntBASIC13.78□□□□□ -0.2
CD53P19397 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.78□□□□□ -0.2
CD53P19397 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CD53P19397 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CD53P19397 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.78□□□□□ -0.2
CD53P19397 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD53P19397 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD53P19397 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.77□□□□□ -0.2
CD53P19397 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CD53P19397 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.77□□□□□ -0.2
CD53P19397 AC041040.2-201ENST00000622926 2899 ntBASIC13.77□□□□□ -0.2
CD53P19397 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.77□□□□□ -0.2
CD53P19397 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD53P19397 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD53P19397 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CD53P19397 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD53P19397 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CD53P19397 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CD53P19397 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
CD53P19397 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.77□□□□□ -0.21
CD53P19397 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.77□□□□□ -0.21
CD53P19397 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CD53P19397 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 AC245100.3-201ENST00000441281 285 ntBASIC13.77□□□□□ -0.21
CD53P19397 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.77□□□□□ -0.21
CD53P19397 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 AC092552.1-201ENST00000547243 906 ntBASIC13.77□□□□□ -0.21
CD53P19397 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.77□□□□□ -0.21
CD53P19397 AC092337.1-201ENST00000568699 1129 ntBASIC13.77□□□□□ -0.21
CD53P19397 MIR4525-201ENST00000580000 75 ntBASIC13.77□□□□□ -0.21
CD53P19397 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 CYP4F24P-201ENST00000586049 1580 ntBASIC13.77□□□□□ -0.21
CD53P19397 AC008735.3-201ENST00000596646 500 ntBASIC13.77□□□□□ -0.21
CD53P19397 REXO1L6P-201ENST00000603433 1515 ntBASIC13.77□□□□□ -0.21
CD53P19397 TMEM261P1-201ENST00000604899 340 ntBASIC13.77□□□□□ -0.21
CD53P19397 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.77□□□□□ -0.21
CD53P19397 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 AC139749.1-202ENST00000617529 3139 ntBASIC13.77□□□□□ -0.21
CD53P19397 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CD53P19397 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 AC097376.2-205ENST00000610159 5334 ntBASIC13.77□□□□□ -0.21
CD53P19397 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.77□□□□□ -0.21
CD53P19397 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD53P19397 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.76□□□□□ -0.21
CD53P19397 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.76□□□□□ -0.21
CD53P19397 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD53P19397 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD53P19397 AC113367.3-201ENST00000508316 1912 ntBASIC13.76□□□□□ -0.21
CD53P19397 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CD53P19397 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD53P19397 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.76□□□□□ -0.21
CD53P19397 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
CD53P19397 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms