Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NCLP19338 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCLP19338 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NCLP19338 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCLP19338 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.07■□□□□ 0.48
NCLP19338 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.07■□□□□ 0.48
NCLP19338 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 TUBB3P1-201ENST00000405796 1332 ntBASIC18.07■□□□□ 0.48
NCLP19338 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NCLP19338 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 AL928921.2-201ENST00000641325 2442 ntBASIC18.07■□□□□ 0.48
NCLP19338 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NCLP19338 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
NCLP19338 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.07■□□□□ 0.48
NCLP19338 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NCLP19338 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 DUX4L27-201ENST00000554796 1261 ntBASIC18.07■□□□□ 0.48
NCLP19338 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NCLP19338 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.07■□□□□ 0.48
NCLP19338 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NCLP19338 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.07■□□□□ 0.48
NCLP19338 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.07■□□□□ 0.48
NCLP19338 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NCLP19338 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.07■□□□□ 0.48
NCLP19338 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.07■□□□□ 0.48
NCLP19338 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.07■□□□□ 0.48
NCLP19338 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC18.07■□□□□ 0.48
NCLP19338 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCLP19338 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NCLP19338 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.06■□□□□ 0.48
NCLP19338 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NCLP19338 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.06■□□□□ 0.48
NCLP19338 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.06■□□□□ 0.48
NCLP19338 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NCLP19338 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 SPDYE7P-202ENST00000420373 878 ntBASIC18.06■□□□□ 0.48
NCLP19338 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.06■□□□□ 0.48
NCLP19338 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.06■□□□□ 0.48
NCLP19338 ALG1L8P-201ENST00000533887 760 ntBASIC18.06■□□□□ 0.48
NCLP19338 RARRES2P9-201ENST00000565168 469 ntBASIC18.06■□□□□ 0.48
NCLP19338 MIR3197-201ENST00000582241 73 ntBASIC18.06■□□□□ 0.48
NCLP19338 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.06■□□□□ 0.48
NCLP19338 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
NCLP19338 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC18.06■□□□□ 0.48
NCLP19338 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCLP19338 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NCLP19338 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NCLP19338 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NCLP19338 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.05■□□□□ 0.48
NCLP19338 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
NCLP19338 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.05■□□□□ 0.48
NCLP19338 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCLP19338 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms