Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC20.27■□□□□ 0.84
ATF3P18847 PPIA-210ENST00000620047 827 ntTSL 5 BASIC20.27■□□□□ 0.84
ATF3P18847 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATF3P18847 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.27■□□□□ 0.84
ATF3P18847 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.27■□□□□ 0.84
ATF3P18847 AC023090.2-201ENST00000625182 2110 ntBASIC20.27■□□□□ 0.84
ATF3P18847 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.27■□□□□ 0.83
ATF3P18847 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ATF3P18847 AL139384.1-201ENST00000612143 3047 ntBASIC20.27■□□□□ 0.83
ATF3P18847 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ATF3P18847 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
ATF3P18847 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ATF3P18847 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.26■□□□□ 0.83
ATF3P18847 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ATF3P18847 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC20.26■□□□□ 0.83
ATF3P18847 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ATF3P18847 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC20.26■□□□□ 0.83
ATF3P18847 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC20.26■□□□□ 0.83
ATF3P18847 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.26■□□□□ 0.83
ATF3P18847 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC20.26■□□□□ 0.83
ATF3P18847 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ATF3P18847 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ATF3P18847 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 ZNF436-AS1-201ENST00000335648 2547 ntBASIC20.26■□□□□ 0.83
ATF3P18847 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ATF3P18847 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATF3P18847 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC20.26■□□□□ 0.83
ATF3P18847 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATF3P18847 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 AC004554.1-201ENST00000422830 1468 ntBASIC20.25■□□□□ 0.83
ATF3P18847 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATF3P18847 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF3P18847 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
ATF3P18847 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
ATF3P18847 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
ATF3P18847 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
ATF3P18847 NME4-203ENST00000397722 1232 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF3P18847 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF3P18847 RN7SL23P-201ENST00000484055 275 ntBASIC20.25■□□□□ 0.83
ATF3P18847 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.25■□□□□ 0.83
ATF3P18847 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF3P18847 MIR6746-201ENST00000620971 63 ntBASIC20.25■□□□□ 0.83
ATF3P18847 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.25■□□□□ 0.83
ATF3P18847 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF3P18847 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATF3P18847 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC20.25■□□□□ 0.83
ATF3P18847 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATF3P18847 TEKT4P2-202ENST00000559466 1312 ntBASIC20.25■□□□□ 0.83
ATF3P18847 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.25■□□□□ 0.83
ATF3P18847 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC20.24■□□□□ 0.83
ATF3P18847 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATF3P18847 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ATF3P18847 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
ATF3P18847 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ATF3P18847 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATF3P18847 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
ATF3P18847 SURF4-203ENST00000371991 715 ntTSL 3 BASIC20.24■□□□□ 0.83
ATF3P18847 MIR566-201ENST00000385187 94 ntBASIC20.24■□□□□ 0.83
ATF3P18847 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.24■□□□□ 0.83
ATF3P18847 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC20.24■□□□□ 0.83
ATF3P18847 AC018638.5-201ENST00000450885 754 ntBASIC20.24■□□□□ 0.83
ATF3P18847 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.24■□□□□ 0.83
ATF3P18847 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC20.24■□□□□ 0.83
ATF3P18847 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC20.24■□□□□ 0.83
ATF3P18847 AC010632.2-201ENST00000588369 1224 ntBASIC20.24■□□□□ 0.83
ATF3P18847 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC20.24■□□□□ 0.83
ATF3P18847 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATF3P18847 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms