Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ATF1P18846 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATF1P18846 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ATF1P18846 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.29□□□□□ -0.28
ATF1P18846 AL121723.1-201ENST00000445194 1519 ntBASIC13.29□□□□□ -0.28
ATF1P18846 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.29□□□□□ -0.28
ATF1P18846 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.28□□□□□ -0.28
ATF1P18846 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ATF1P18846 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.28□□□□□ -0.28
ATF1P18846 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.28□□□□□ -0.28
ATF1P18846 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ATF1P18846 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.28□□□□□ -0.28
ATF1P18846 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.28□□□□□ -0.28
ATF1P18846 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.28□□□□□ -0.28
ATF1P18846 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 TOMM22P5-201ENST00000416399 439 ntBASIC13.28□□□□□ -0.28
ATF1P18846 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.28□□□□□ -0.28
ATF1P18846 AP006288.1-201ENST00000446065 395 ntBASIC13.28□□□□□ -0.28
ATF1P18846 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ATF1P18846 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.28□□□□□ -0.28
ATF1P18846 AC092865.5-201ENST00000545435 363 ntBASIC13.28□□□□□ -0.28
ATF1P18846 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ATF1P18846 SNHG9-202ENST00000564014 471 ntBASIC13.28□□□□□ -0.28
ATF1P18846 TEX28P1-201ENST00000613479 1221 ntBASIC13.28□□□□□ -0.28
ATF1P18846 TEX28P2-201ENST00000617764 1221 ntBASIC13.28□□□□□ -0.28
ATF1P18846 SPDYE12P-201ENST00000618416 771 ntBASIC13.28□□□□□ -0.28
ATF1P18846 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.28□□□□□ -0.28
ATF1P18846 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.28□□□□□ -0.28
ATF1P18846 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ATF1P18846 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ATF1P18846 LILRP1-201ENST00000444199 1370 ntBASIC13.28□□□□□ -0.28
ATF1P18846 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ATF1P18846 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.28□□□□□ -0.28
ATF1P18846 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 AC105206.1-202ENST00000314927 2368 ntBASIC13.28□□□□□ -0.28
ATF1P18846 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATF1P18846 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.27□□□□□ -0.28
ATF1P18846 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.27□□□□□ -0.28
ATF1P18846 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.27□□□□□ -0.28
ATF1P18846 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ATF1P18846 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.27□□□□□ -0.28
ATF1P18846 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATF1P18846 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
ATF1P18846 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATF1P18846 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ATF1P18846 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.27□□□□□ -0.29
ATF1P18846 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.27□□□□□ -0.29
ATF1P18846 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 HLA-J-203ENST00000494367 1087 ntBASIC13.27□□□□□ -0.29
ATF1P18846 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 AC051619.7-201ENST00000568314 623 ntBASIC13.27□□□□□ -0.29
ATF1P18846 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
ATF1P18846 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.27□□□□□ -0.29
ATF1P18846 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ATF1P18846 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms