Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.24■□□□□ 0.03
VCLP18206 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VCLP18206 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.24■□□□□ 0.03
VCLP18206 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VCLP18206 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.24■□□□□ 0.03
VCLP18206 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VCLP18206 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VCLP18206 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VCLP18206 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 MYO15B-237ENST00000642007 4893 ntBASIC15.23■□□□□ 0.03
VCLP18206 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.23■□□□□ 0.03
VCLP18206 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 AC007389.4-201ENST00000454674 793 ntBASIC15.23■□□□□ 0.03
VCLP18206 INE1-201ENST00000456273 945 ntBASIC15.23■□□□□ 0.03
VCLP18206 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.23■□□□□ 0.03
VCLP18206 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.23■□□□□ 0.03
VCLP18206 AC026410.3-201ENST00000514280 936 ntBASIC15.23■□□□□ 0.03
VCLP18206 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.23■□□□□ 0.03
VCLP18206 AL359711.2-201ENST00000563105 872 ntBASIC15.23■□□□□ 0.03
VCLP18206 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
VCLP18206 AC025181.2-201ENST00000606994 802 ntBASIC15.23■□□□□ 0.03
VCLP18206 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
VCLP18206 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VCLP18206 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VCLP18206 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
VCLP18206 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
VCLP18206 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
VCLP18206 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VCLP18206 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
VCLP18206 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.22■□□□□ 0.03
VCLP18206 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.22■□□□□ 0.03
VCLP18206 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.22■□□□□ 0.03
VCLP18206 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
VCLP18206 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.22■□□□□ 0.03
VCLP18206 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.22■□□□□ 0.03
VCLP18206 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
VCLP18206 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.22■□□□□ 0.03
VCLP18206 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.22■□□□□ 0.03
VCLP18206 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.22■□□□□ 0.03
VCLP18206 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.22■□□□□ 0.03
VCLP18206 AC239800.4-201ENST00000603712 296 ntBASIC15.22■□□□□ 0.03
VCLP18206 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
VCLP18206 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.22■□□□□ 0.03
VCLP18206 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VCLP18206 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.22■□□□□ 0.03
VCLP18206 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.22■□□□□ 0.03
VCLP18206 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms