Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC25.51■■□□□ 1.67
TOP2AP11388 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.67
TOP2AP11388 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC25.51■■□□□ 1.67
TOP2AP11388 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC25.51■■□□□ 1.67
TOP2AP11388 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC25.51■■□□□ 1.67
TOP2AP11388 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 PGAM1P12-201ENST00000505622 748 ntBASIC25.51■■□□□ 1.67
TOP2AP11388 AC093826.1-201ENST00000508655 993 ntBASIC25.51■■□□□ 1.67
TOP2AP11388 AC084752.1-201ENST00000509766 622 ntBASIC25.51■■□□□ 1.67
TOP2AP11388 MIR4472-1-201ENST00000584349 80 ntBASIC25.51■■□□□ 1.67
TOP2AP11388 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC25.51■■□□□ 1.67
TOP2AP11388 AC073592.2-201ENST00000623062 780 ntBASIC25.51■■□□□ 1.67
TOP2AP11388 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
TOP2AP11388 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
TOP2AP11388 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC25.51■■□□□ 1.67
TOP2AP11388 AC006372.4-201ENST00000624122 1543 ntBASIC25.51■■□□□ 1.67
TOP2AP11388 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TOP2AP11388 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TOP2AP11388 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
TOP2AP11388 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TOP2AP11388 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC25.5■■□□□ 1.67
TOP2AP11388 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TOP2AP11388 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TOP2AP11388 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
TOP2AP11388 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TOP2AP11388 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC25.5■■□□□ 1.67
TOP2AP11388 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC25.5■■□□□ 1.67
TOP2AP11388 PPIA-208ENST00000489459 907 ntTSL 2 BASIC25.5■■□□□ 1.67
TOP2AP11388 RN7SL564P-201ENST00000496309 250 ntBASIC25.5■■□□□ 1.67
TOP2AP11388 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC25.5■■□□□ 1.67
TOP2AP11388 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC25.5■■□□□ 1.67
TOP2AP11388 PPIA-210ENST00000620047 827 ntTSL 5 BASIC25.5■■□□□ 1.67
TOP2AP11388 AC138466.4-201ENST00000623965 852 ntBASIC25.5■■□□□ 1.67
TOP2AP11388 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
TOP2AP11388 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC25.5■■□□□ 1.67
TOP2AP11388 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
TOP2AP11388 LCK-206ENST00000373564 2137 ntTSL 5 BASIC25.5■■□□□ 1.67
TOP2AP11388 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC25.5■■□□□ 1.67
TOP2AP11388 FTX-216ENST00000638985 1367 ntTSL 5 BASIC25.5■■□□□ 1.67
TOP2AP11388 PPT1-215ENST00000641471 2368 ntBASIC25.5■■□□□ 1.67
TOP2AP11388 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TOP2AP11388 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
TOP2AP11388 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TOP2AP11388 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TOP2AP11388 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC25.49■■□□□ 1.67
TOP2AP11388 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TOP2AP11388 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TOP2AP11388 GCSHP3-201ENST00000431120 391 ntBASIC25.49■■□□□ 1.67
TOP2AP11388 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TOP2AP11388 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC25.49■■□□□ 1.67
TOP2AP11388 AP003398.1-201ENST00000531124 318 ntBASIC25.49■■□□□ 1.67
TOP2AP11388 AL118516.1-201ENST00000564152 670 ntBASIC25.49■■□□□ 1.67
TOP2AP11388 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC25.49■■□□□ 1.67
TOP2AP11388 AC007250.1-201ENST00000608934 338 ntBASIC25.49■■□□□ 1.67
TOP2AP11388 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC25.49■■□□□ 1.67
TOP2AP11388 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TOP2AP11388 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC25.49■■□□□ 1.67
TOP2AP11388 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TOP2AP11388 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TOP2AP11388 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TOP2AP11388 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
TOP2AP11388 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC25.49■■□□□ 1.67
TOP2AP11388 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 RNVU1-8-201ENST00000364272 125 ntBASIC25.48■■□□□ 1.67
TOP2AP11388 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC25.48■■□□□ 1.67
TOP2AP11388 AC018638.5-201ENST00000450885 754 ntBASIC25.48■■□□□ 1.67
TOP2AP11388 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
TOP2AP11388 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC25.48■■□□□ 1.67
TOP2AP11388 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC25.48■■□□□ 1.67
TOP2AP11388 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC25.48■■□□□ 1.67
TOP2AP11388 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC25.48■■□□□ 1.67
TOP2AP11388 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
TOP2AP11388 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC25.48■■□□□ 1.67
TOP2AP11388 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
TOP2AP11388 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TOP2AP11388 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC25.48■■□□□ 1.67
TOP2AP11388 NHP2-202ENST00000314397 599 ntTSL 2 BASIC25.47■■□□□ 1.67
TOP2AP11388 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TOP2AP11388 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms