Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
UBCP0CG48 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBCP0CG48 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBCP0CG48 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UBCP0CG48 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UBCP0CG48 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UBCP0CG48 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.28□□□□□ -0.28
UBCP0CG48 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.28□□□□□ -0.28
UBCP0CG48 KLF2P3-201ENST00000451977 1087 ntBASIC13.28□□□□□ -0.28
UBCP0CG48 TPT1P11-201ENST00000458482 498 ntBASIC13.28□□□□□ -0.28
UBCP0CG48 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.28□□□□□ -0.28
UBCP0CG48 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.28□□□□□ -0.28
UBCP0CG48 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.28□□□□□ -0.28
UBCP0CG48 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
UBCP0CG48 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.28□□□□□ -0.28
UBCP0CG48 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.28□□□□□ -0.28
UBCP0CG48 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.28□□□□□ -0.28
UBCP0CG48 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBCP0CG48 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UBCP0CG48 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBCP0CG48 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.28□□□□□ -0.28
UBCP0CG48 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
UBCP0CG48 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBCP0CG48 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBCP0CG48 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBCP0CG48 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBCP0CG48 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.27□□□□□ -0.28
UBCP0CG48 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
UBCP0CG48 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBCP0CG48 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBCP0CG48 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.27□□□□□ -0.28
UBCP0CG48 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBCP0CG48 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBCP0CG48 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBCP0CG48 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBCP0CG48 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.27□□□□□ -0.28
UBCP0CG48 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.27□□□□□ -0.28
UBCP0CG48 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
UBCP0CG48 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
UBCP0CG48 TSEN15P1-201ENST00000423257 515 ntBASIC13.27□□□□□ -0.29
UBCP0CG48 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.27□□□□□ -0.29
UBCP0CG48 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.27□□□□□ -0.29
UBCP0CG48 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.27□□□□□ -0.29
UBCP0CG48 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.27□□□□□ -0.29
UBCP0CG48 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.27□□□□□ -0.29
UBCP0CG48 AC027369.6-201ENST00000525520 931 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms