Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSF1P09603 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSF1P09603 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CSF1P09603 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSF1P09603 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CSF1P09603 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CSF1P09603 TUBB3P1-201ENST00000405796 1332 ntBASIC13.13□□□□□ -0.31
CSF1P09603 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.13□□□□□ -0.31
CSF1P09603 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.13□□□□□ -0.31
CSF1P09603 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 MIR943-201ENST00000401286 94 ntBASIC13.13□□□□□ -0.31
CSF1P09603 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.13□□□□□ -0.31
CSF1P09603 AC005034.1-201ENST00000426657 489 ntBASIC13.13□□□□□ -0.31
CSF1P09603 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.13□□□□□ -0.31
CSF1P09603 KLF2P3-201ENST00000451977 1087 ntBASIC13.13□□□□□ -0.31
CSF1P09603 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 AC125807.1-201ENST00000483097 614 ntBASIC13.13□□□□□ -0.31
CSF1P09603 AC105233.2-201ENST00000523697 349 ntBASIC13.13□□□□□ -0.31
CSF1P09603 AF228730.5-201ENST00000530288 346 ntBASIC13.13□□□□□ -0.31
CSF1P09603 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.13□□□□□ -0.31
CSF1P09603 RARRES2P8-201ENST00000566335 367 ntBASIC13.13□□□□□ -0.31
CSF1P09603 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 AC099522.2-201ENST00000607001 744 ntBASIC13.13□□□□□ -0.31
CSF1P09603 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.13□□□□□ -0.31
CSF1P09603 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CSF1P09603 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.13□□□□□ -0.31
CSF1P09603 AKAP8P1-201ENST00000434743 1349 ntBASIC13.13□□□□□ -0.31
CSF1P09603 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSF1P09603 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.12□□□□□ -0.31
CSF1P09603 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CSF1P09603 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CSF1P09603 AC007787.1-201ENST00000588095 1583 ntBASIC13.12□□□□□ -0.31
CSF1P09603 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.12□□□□□ -0.31
CSF1P09603 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.12□□□□□ -0.31
CSF1P09603 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.12□□□□□ -0.31
CSF1P09603 AC107890.1-201ENST00000422478 521 ntBASIC13.12□□□□□ -0.31
CSF1P09603 AC055876.3-201ENST00000431496 288 ntBASIC13.12□□□□□ -0.31
CSF1P09603 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.12□□□□□ -0.31
CSF1P09603 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.12□□□□□ -0.31
CSF1P09603 IGHV3-42-201ENST00000520410 361 ntBASIC13.12□□□□□ -0.31
CSF1P09603 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.12□□□□□ -0.31
CSF1P09603 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSF1P09603 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms