Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.84■□□□□ 0.13
APOEP02649 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
APOEP02649 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 MROH4P-201ENST00000431302 1578 ntBASIC15.84■□□□□ 0.13
APOEP02649 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 BOLA2P3-201ENST00000404566 256 ntBASIC15.84■□□□□ 0.13
APOEP02649 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
APOEP02649 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.84■□□□□ 0.13
APOEP02649 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.84■□□□□ 0.13
APOEP02649 AC106760.1-201ENST00000508690 800 ntBASIC15.84■□□□□ 0.13
APOEP02649 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.84■□□□□ 0.13
APOEP02649 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.84■□□□□ 0.13
APOEP02649 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.84■□□□□ 0.13
APOEP02649 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.84■□□□□ 0.13
APOEP02649 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
APOEP02649 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.84■□□□□ 0.13
APOEP02649 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.84■□□□□ 0.13
APOEP02649 WASH3P-207ENST00000560956 1394 ntBASIC15.84■□□□□ 0.13
APOEP02649 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.84■□□□□ 0.13
APOEP02649 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
APOEP02649 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
APOEP02649 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
APOEP02649 ZBED1P1-201ENST00000502364 1930 ntBASIC15.84■□□□□ 0.13
APOEP02649 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
APOEP02649 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
APOEP02649 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.84■□□□□ 0.13
APOEP02649 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
APOEP02649 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.84■□□□□ 0.13
APOEP02649 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.84■□□□□ 0.13
APOEP02649 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.84■□□□□ 0.13
APOEP02649 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
APOEP02649 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
APOEP02649 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.83■□□□□ 0.13
APOEP02649 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
APOEP02649 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
APOEP02649 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
APOEP02649 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.83■□□□□ 0.13
APOEP02649 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
APOEP02649 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.83■□□□□ 0.12
APOEP02649 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.83■□□□□ 0.12
APOEP02649 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
APOEP02649 FGD5P1-202ENST00000614866 2498 ntBASIC15.83■□□□□ 0.12
APOEP02649 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
APOEP02649 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.83■□□□□ 0.12
APOEP02649 C2orf27AP3-201ENST00000434123 579 ntBASIC15.83■□□□□ 0.12
APOEP02649 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.83■□□□□ 0.12
APOEP02649 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.83■□□□□ 0.12
APOEP02649 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.83■□□□□ 0.12
APOEP02649 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
APOEP02649 AL354718.3-201ENST00000616414 581 ntBASIC15.83■□□□□ 0.12
APOEP02649 CR382287.1-201ENST00000623954 586 ntBASIC15.83■□□□□ 0.12
APOEP02649 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.83■□□□□ 0.12
APOEP02649 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.83■□□□□ 0.12
APOEP02649 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.83■□□□□ 0.12
APOEP02649 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
APOEP02649 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
APOEP02649 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
APOEP02649 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
APOEP02649 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
APOEP02649 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
APOEP02649 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
APOEP02649 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
APOEP02649 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
APOEP02649 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.82■□□□□ 0.12
APOEP02649 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.82■□□□□ 0.12
APOEP02649 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APOEP02649 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
APOEP02649 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms