Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.93■□□□□ 0.14
RTN3O95197 TUBB1P1-201ENST00000503144 1300 ntBASIC15.93■□□□□ 0.14
RTN3O95197 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN3O95197 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 CICP20-201ENST00000443330 2801 ntBASIC15.92■□□□□ 0.14
RTN3O95197 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN3O95197 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN3O95197 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
RTN3O95197 AL355994.2-201ENST00000447882 704 ntBASIC15.92■□□□□ 0.14
RTN3O95197 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN3O95197 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.92■□□□□ 0.14
RTN3O95197 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
RTN3O95197 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.92■□□□□ 0.14
RTN3O95197 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.92■□□□□ 0.14
RTN3O95197 AL157414.3-201ENST00000624276 1954 ntBASIC15.92■□□□□ 0.14
RTN3O95197 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RTN3O95197 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RTN3O95197 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN3O95197 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.92■□□□□ 0.14
RTN3O95197 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
RTN3O95197 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RTN3O95197 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RTN3O95197 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RTN3O95197 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.92■□□□□ 0.14
RTN3O95197 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RTN3O95197 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RTN3O95197 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RTN3O95197 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.91■□□□□ 0.14
RTN3O95197 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 AC023024.2-201ENST00000623561 1993 ntBASIC15.91■□□□□ 0.14
RTN3O95197 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 WASH3P-207ENST00000560956 1394 ntBASIC15.91■□□□□ 0.14
RTN3O95197 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RTN3O95197 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.91■□□□□ 0.14
RTN3O95197 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.91■□□□□ 0.14
RTN3O95197 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.91■□□□□ 0.14
RTN3O95197 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RTN3O95197 POM121L8P-201ENST00000417732 1281 ntBASIC15.91■□□□□ 0.14
RTN3O95197 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.91■□□□□ 0.14
RTN3O95197 POM121L9P-203ENST00000441984 1285 ntBASIC15.91■□□□□ 0.14
RTN3O95197 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.91■□□□□ 0.14
RTN3O95197 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.91■□□□□ 0.14
RTN3O95197 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.91■□□□□ 0.14
RTN3O95197 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.91■□□□□ 0.14
RTN3O95197 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.91■□□□□ 0.14
RTN3O95197 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.91■□□□□ 0.14
RTN3O95197 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RTN3O95197 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.91■□□□□ 0.14
RTN3O95197 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.91■□□□□ 0.14
RTN3O95197 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RTN3O95197 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RTN3O95197 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RTN3O95197 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms