Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.74■□□□□ 0.11
BEST1O76090 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.74■□□□□ 0.11
BEST1O76090 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST1O76090 TLE1P1-201ENST00000422965 589 ntBASIC15.74■□□□□ 0.11
BEST1O76090 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST1O76090 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST1O76090 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST1O76090 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST1O76090 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
BEST1O76090 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST1O76090 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.74■□□□□ 0.11
BEST1O76090 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST1O76090 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST1O76090 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
BEST1O76090 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST1O76090 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
BEST1O76090 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST1O76090 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.74■□□□□ 0.11
BEST1O76090 MIR6799-201ENST00000620297 69 ntBASIC15.74■□□□□ 0.11
BEST1O76090 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST1O76090 AP001002.3-201ENST00000623482 206 ntBASIC15.74■□□□□ 0.11
BEST1O76090 AC002472.3-201ENST00000640124 621 ntBASIC15.74■□□□□ 0.11
BEST1O76090 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 CICP24-201ENST00000605464 2705 ntBASIC15.74■□□□□ 0.11
BEST1O76090 CICP14-201ENST00000629111 2732 ntBASIC15.74■□□□□ 0.11
BEST1O76090 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BEST1O76090 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
BEST1O76090 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
BEST1O76090 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.74■□□□□ 0.11
BEST1O76090 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.74■□□□□ 0.11
BEST1O76090 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 AC015818.8-201ENST00000587907 1519 ntBASIC15.73■□□□□ 0.11
BEST1O76090 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BEST1O76090 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.73■□□□□ 0.11
BEST1O76090 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.73■□□□□ 0.11
BEST1O76090 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
BEST1O76090 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.73■□□□□ 0.11
BEST1O76090 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 Z93015.1-201ENST00000451718 390 ntBASIC15.73■□□□□ 0.11
BEST1O76090 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BEST1O76090 AC131206.1-201ENST00000538078 1211 ntBASIC15.73■□□□□ 0.11
BEST1O76090 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST1O76090 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.73■□□□□ 0.11
BEST1O76090 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
BEST1O76090 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.73■□□□□ 0.11
BEST1O76090 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BEST1O76090 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST1O76090 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
BEST1O76090 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.73■□□□□ 0.11
BEST1O76090 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BEST1O76090 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BEST1O76090 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.73■□□□□ 0.11
BEST1O76090 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
BEST1O76090 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.72■□□□□ 0.11
BEST1O76090 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
BEST1O76090 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.72■□□□□ 0.11
BEST1O76090 BRWD1P1-201ENST00000401091 371 ntBASIC15.72■□□□□ 0.11
BEST1O76090 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BEST1O76090 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 MTX1P1-201ENST00000440904 838 ntBASIC15.72■□□□□ 0.11
BEST1O76090 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 MIR4783-201ENST00000580343 82 ntBASIC15.72■□□□□ 0.11
BEST1O76090 RN7SL219P-201ENST00000582872 296 ntBASIC15.72■□□□□ 0.11
BEST1O76090 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
BEST1O76090 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.72■□□□□ 0.11
BEST1O76090 AL096828.3-201ENST00000615354 462 ntBASIC15.72■□□□□ 0.11
BEST1O76090 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.72■□□□□ 0.11
BEST1O76090 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
BEST1O76090 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms