Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.36□□□□□ -0.43
SSSCA1O60232 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.36□□□□□ -0.43
SSSCA1O60232 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 COL6A4P2-202ENST00000504443 2753 ntBASIC12.36□□□□□ -0.43
SSSCA1O60232 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.36□□□□□ -0.43
SSSCA1O60232 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.36□□□□□ -0.43
SSSCA1O60232 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SSSCA1O60232 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SSSCA1O60232 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSSCA1O60232 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.35□□□□□ -0.43
SSSCA1O60232 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SSSCA1O60232 AP3S2-216ENST00000617003 1561 ntBASIC12.35□□□□□ -0.43
SSSCA1O60232 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.35□□□□□ -0.43
SSSCA1O60232 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 MIR346-201ENST00000362234 95 ntBASIC12.35□□□□□ -0.43
SSSCA1O60232 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SSSCA1O60232 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.35□□□□□ -0.43
SSSCA1O60232 FAM86C2P-203ENST00000528684 1004 ntBASIC12.35□□□□□ -0.43
SSSCA1O60232 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.35□□□□□ -0.43
SSSCA1O60232 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.35□□□□□ -0.43
SSSCA1O60232 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.35□□□□□ -0.43
SSSCA1O60232 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.35□□□□□ -0.43
SSSCA1O60232 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.35□□□□□ -0.43
SSSCA1O60232 AC025181.2-201ENST00000606994 802 ntBASIC12.35□□□□□ -0.43
SSSCA1O60232 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
SSSCA1O60232 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SSSCA1O60232 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SSSCA1O60232 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.35□□□□□ -0.43
SSSCA1O60232 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSSCA1O60232 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.35□□□□□ -0.43
SSSCA1O60232 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SSSCA1O60232 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SSSCA1O60232 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 AC130686.1-201ENST00000622936 2466 ntBASIC12.34□□□□□ -0.43
SSSCA1O60232 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SSSCA1O60232 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSSCA1O60232 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms