Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP2AO43633 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP2AO43633 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP2AO43633 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP2AO43633 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
CHMP2AO43633 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP2AO43633 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP2AO43633 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHMP2AO43633 FAM8A4P-201ENST00000435433 1213 ntBASIC16.95■□□□□ 0.3
CHMP2AO43633 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP2AO43633 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.95■□□□□ 0.3
CHMP2AO43633 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.95■□□□□ 0.3
CHMP2AO43633 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP2AO43633 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 AC023310.1-201ENST00000554836 735 ntBASIC16.95■□□□□ 0.3
CHMP2AO43633 MIR4741-201ENST00000579822 90 ntBASIC16.95■□□□□ 0.3
CHMP2AO43633 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.95■□□□□ 0.3
CHMP2AO43633 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP2AO43633 AC010328.2-201ENST00000597698 1111 ntBASIC16.95■□□□□ 0.3
CHMP2AO43633 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.95■□□□□ 0.3
CHMP2AO43633 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CHMP2AO43633 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHMP2AO43633 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.95■□□□□ 0.3
CHMP2AO43633 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHMP2AO43633 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CHMP2AO43633 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHMP2AO43633 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP2AO43633 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.94■□□□□ 0.3
CHMP2AO43633 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.94■□□□□ 0.3
CHMP2AO43633 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP2AO43633 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.94■□□□□ 0.3
CHMP2AO43633 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.94■□□□□ 0.3
CHMP2AO43633 AL391280.1-201ENST00000506969 1062 ntBASIC16.94■□□□□ 0.3
CHMP2AO43633 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP2AO43633 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.94■□□□□ 0.3
CHMP2AO43633 AP006547.1-201ENST00000563435 692 ntBASIC16.94■□□□□ 0.3
CHMP2AO43633 AC138466.3-201ENST00000619983 221 ntBASIC16.94■□□□□ 0.3
CHMP2AO43633 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.94■□□□□ 0.3
CHMP2AO43633 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHMP2AO43633 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.94■□□□□ 0.3
CHMP2AO43633 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHMP2AO43633 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHMP2AO43633 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHMP2AO43633 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.93■□□□□ 0.3
CHMP2AO43633 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CHMP2AO43633 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CHMP2AO43633 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP2AO43633 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP2AO43633 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP2AO43633 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHMP2AO43633 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP2AO43633 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CHMP2AO43633 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.93■□□□□ 0.3
CHMP2AO43633 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP2AO43633 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP2AO43633 REXO1L6P-201ENST00000603433 1515 ntBASIC16.93■□□□□ 0.3
CHMP2AO43633 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP2AO43633 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CHMP2AO43633 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHMP2AO43633 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms