Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC100827.2-201ENST00000563214 1194 ntBASIC18.99■□□□□ 0.63
NPHP1O15259 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.99■□□□□ 0.63
NPHP1O15259 AL645939.5-201ENST00000606834 243 ntBASIC18.99■□□□□ 0.63
NPHP1O15259 AL136295.7-201ENST00000619226 1200 ntBASIC18.99■□□□□ 0.63
NPHP1O15259 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.99■□□□□ 0.63
NPHP1O15259 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPHP1O15259 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NPHP1O15259 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 AC004899.1-201ENST00000424687 1714 ntBASIC18.98■□□□□ 0.63
NPHP1O15259 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.98■□□□□ 0.63
NPHP1O15259 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 DPM3-202ENST00000368399 517 ntBASIC18.98■□□□□ 0.63
NPHP1O15259 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
NPHP1O15259 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 MIR33B-201ENST00000385104 96 ntBASIC18.98■□□□□ 0.63
NPHP1O15259 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NPHP1O15259 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.98■□□□□ 0.63
NPHP1O15259 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.98■□□□□ 0.63
NPHP1O15259 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.98■□□□□ 0.63
NPHP1O15259 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.98■□□□□ 0.63
NPHP1O15259 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
NPHP1O15259 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.98■□□□□ 0.63
NPHP1O15259 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.98■□□□□ 0.63
NPHP1O15259 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.98■□□□□ 0.63
NPHP1O15259 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 AP002414.2-201ENST00000591780 3365 ntBASIC18.98■□□□□ 0.63
NPHP1O15259 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.98■□□□□ 0.63
NPHP1O15259 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NPHP1O15259 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.98■□□□□ 0.63
NPHP1O15259 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPHP1O15259 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.98■□□□□ 0.63
NPHP1O15259 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.98■□□□□ 0.63
NPHP1O15259 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.97■□□□□ 0.63
NPHP1O15259 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NPHP1O15259 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.97■□□□□ 0.63
NPHP1O15259 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.97■□□□□ 0.63
NPHP1O15259 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NPHP1O15259 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NPHP1O15259 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NPHP1O15259 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NPHP1O15259 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
NPHP1O15259 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.97■□□□□ 0.63
NPHP1O15259 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.97■□□□□ 0.63
NPHP1O15259 MIR4683-201ENST00000579659 81 ntBASIC18.97■□□□□ 0.63
NPHP1O15259 MIR5572-201ENST00000583188 137 ntBASIC18.97■□□□□ 0.63
NPHP1O15259 AC022748.3-201ENST00000621828 275 ntBASIC18.97■□□□□ 0.63
NPHP1O15259 AL645728.2-202ENST00000641679 227 ntBASIC18.97■□□□□ 0.63
NPHP1O15259 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC18.97■□□□□ 0.63
NPHP1O15259 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NPHP1O15259 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPHP1O15259 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.97■□□□□ 0.63
NPHP1O15259 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPHP1O15259 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPHP1O15259 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPHP1O15259 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPHP1O15259 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPHP1O15259 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPHP1O15259 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPHP1O15259 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPHP1O15259 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NPHP1O15259 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.96■□□□□ 0.63
NPHP1O15259 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NPHP1O15259 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPHP1O15259 AL596276.2-201ENST00000447525 331 ntBASIC18.96■□□□□ 0.63
NPHP1O15259 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.96■□□□□ 0.63
NPHP1O15259 AC104073.2-201ENST00000453737 312 ntBASIC18.96■□□□□ 0.63
NPHP1O15259 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NPHP1O15259 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms