Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP2A1O14983 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.17■□□□□ 0.34
ATP2A1O14983 AC100827.2-201ENST00000563214 1194 ntBASIC17.17■□□□□ 0.34
ATP2A1O14983 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 AC132192.2-201ENST00000596206 1147 ntBASIC17.17■□□□□ 0.34
ATP2A1O14983 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 BX088702.1-201ENST00000610784 235 ntBASIC17.17■□□□□ 0.34
ATP2A1O14983 AC091812.3-201ENST00000621362 345 ntBASIC17.17■□□□□ 0.34
ATP2A1O14983 AC015967.2-201ENST00000624092 234 ntBASIC17.17■□□□□ 0.34
ATP2A1O14983 AC006435.4-201ENST00000625037 234 ntBASIC17.17■□□□□ 0.34
ATP2A1O14983 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.17■□□□□ 0.34
ATP2A1O14983 AL356737.1-201ENST00000634391 234 ntBASIC17.17■□□□□ 0.34
ATP2A1O14983 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATP2A1O14983 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
ATP2A1O14983 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATP2A1O14983 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ATP2A1O14983 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.17■□□□□ 0.34
ATP2A1O14983 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATP2A1O14983 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ATP2A1O14983 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATP2A1O14983 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ATP2A1O14983 TMBIM7P-203ENST00000641617 1718 ntBASIC17.16■□□□□ 0.34
ATP2A1O14983 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 E2F3P2-201ENST00000447755 1422 ntBASIC17.16■□□□□ 0.34
ATP2A1O14983 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 AC011742.3-201ENST00000439053 820 ntBASIC17.16■□□□□ 0.34
ATP2A1O14983 PUDPP3-201ENST00000445368 636 ntBASIC17.16■□□□□ 0.34
ATP2A1O14983 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 AC104073.2-201ENST00000453737 312 ntBASIC17.16■□□□□ 0.34
ATP2A1O14983 UPF3AP2-201ENST00000457924 1132 ntBASIC17.16■□□□□ 0.34
ATP2A1O14983 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A1O14983 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.16■□□□□ 0.34
ATP2A1O14983 AC026740.1-201ENST00000607068 791 ntBASIC17.16■□□□□ 0.34
ATP2A1O14983 AP001505.2-201ENST00000616815 443 ntBASIC17.16■□□□□ 0.34
ATP2A1O14983 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A1O14983 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A1O14983 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A1O14983 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A1O14983 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATP2A1O14983 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.16■□□□□ 0.34
ATP2A1O14983 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP2A1O14983 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP2A1O14983 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP2A1O14983 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ATP2A1O14983 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP2A1O14983 C18orf15-201ENST00000623680 2534 ntBASIC17.15■□□□□ 0.34
ATP2A1O14983 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP2A1O14983 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP2A1O14983 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ATP2A1O14983 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP2A1O14983 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP2A1O14983 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 AC092506.1-202ENST00000401022 528 ntBASIC17.15■□□□□ 0.34
ATP2A1O14983 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP2A1O14983 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP2A1O14983 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ATP2A1O14983 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP2A1O14983 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.15■□□□□ 0.34
ATP2A1O14983 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.15■□□□□ 0.34
ATP2A1O14983 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ATP2A1O14983 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 KRT8P19-201ENST00000551916 1455 ntBASIC17.15■□□□□ 0.34
ATP2A1O14983 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ATP2A1O14983 AC006058.4-201ENST00000624016 1670 ntBASIC17.15■□□□□ 0.34
ATP2A1O14983 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.15■□□□□ 0.34
ATP2A1O14983 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ATP2A1O14983 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP2A1O14983 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms