Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TLR4O00206 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 AL662890.1-201ENST00000396818 632 ntBASIC14.93□□□□□ -0.02
TLR4O00206 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 HIST2H2BB-201ENST00000449108 381 ntBASIC14.93□□□□□ -0.02
TLR4O00206 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 NDUFV2P1-201ENST00000596415 907 ntBASIC14.93□□□□□ -0.02
TLR4O00206 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 AP001002.3-201ENST00000623482 206 ntBASIC14.93□□□□□ -0.02
TLR4O00206 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.93□□□□□ -0.02
TLR4O00206 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.93□□□□□ -0.02
TLR4O00206 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.93□□□□□ -0.02
TLR4O00206 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.93□□□□□ -0.02
TLR4O00206 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
TLR4O00206 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TLR4O00206 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TLR4O00206 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 CLUHP2-201ENST00000426660 1303 ntBASIC14.92□□□□□ -0.02
TLR4O00206 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TLR4O00206 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.92□□□□□ -0.02
TLR4O00206 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.92□□□□□ -0.02
TLR4O00206 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.92□□□□□ -0.02
TLR4O00206 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.92□□□□□ -0.02
TLR4O00206 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 MIR600HG-201ENST00000449175 5984 ntBASIC14.92□□□□□ -0.02
TLR4O00206 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.92□□□□□ -0.02
TLR4O00206 AL136309.1-201ENST00000403917 691 ntBASIC14.92□□□□□ -0.02
TLR4O00206 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.92□□□□□ -0.02
TLR4O00206 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.92□□□□□ -0.02
TLR4O00206 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.92□□□□□ -0.02
TLR4O00206 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.92□□□□□ -0.02
TLR4O00206 EIF4HP1-201ENST00000453115 687 ntBASIC14.92□□□□□ -0.02
TLR4O00206 SERPINA13P-202ENST00000478994 924 ntBASIC14.92□□□□□ -0.02
TLR4O00206 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.92□□□□□ -0.02
TLR4O00206 MESTP3-201ENST00000503460 968 ntBASIC14.92□□□□□ -0.02
TLR4O00206 AC100850.1-201ENST00000506768 649 ntBASIC14.92□□□□□ -0.02
TLR4O00206 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.92□□□□□ -0.02
TLR4O00206 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.92□□□□□ -0.02
TLR4O00206 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TLR4O00206 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 SSR4P1-203ENST00000599569 2260 ntBASIC14.92□□□□□ -0.02
TLR4O00206 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TLR4O00206 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TLR4O00206 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.92□□□□□ -0.02
TLR4O00206 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.92□□□□□ -0.02
TLR4O00206 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TLR4O00206 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TLR4O00206 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TLR4O00206 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TLR4O00206 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TLR4O00206 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TLR4O00206 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TLR4O00206 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
TLR4O00206 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms