Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 AL139094.1-201ENST00000405549 1188 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 AL442647.2-201ENST00000429864 857 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 DFFBP1-201ENST00000433250 979 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 AP001582.1-201ENST00000525856 295 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 AC123567.1-201ENST00000548294 1261 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 AC124283.3-201ENST00000570869 594 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 CHCHD2P3-201ENST00000603038 451 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 KRT8P14-201ENST00000414254 1442 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 KRT8P22-201ENST00000562317 1415 ntBASIC12.16□□□□□ -0.46
SRRM4A7MD48 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.16□□□□□ -0.46
SRRM4A7MD48 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SRRM4A7MD48 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 TSPY16P-201ENST00000449843 468 ntBASIC12.15□□□□□ -0.46
SRRM4A7MD48 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.15□□□□□ -0.46
SRRM4A7MD48 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 DUX4L47-201ENST00000566374 394 ntBASIC12.15□□□□□ -0.46
SRRM4A7MD48 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 AC008761.3-201ENST00000624803 892 ntBASIC12.15□□□□□ -0.46
SRRM4A7MD48 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.15□□□□□ -0.46
SRRM4A7MD48 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SRRM4A7MD48 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms