Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PCDHA3-202ENST00000532566 4594 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 AC005252.3-201ENST00000623855 2258 ntBASIC16.03■□□□□ 0.16
RCCD1A6NED2 AC100757.3-201ENST00000622361 1406 ntBASIC16.03■□□□□ 0.16
RCCD1A6NED2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 AC040160.2-201ENST00000623816 1675 ntBASIC16.03■□□□□ 0.16
RCCD1A6NED2 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 TSSK5P-201ENST00000423978 907 ntBASIC16.03■□□□□ 0.16
RCCD1A6NED2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 KLF2P3-201ENST00000451977 1087 ntBASIC16.03■□□□□ 0.16
RCCD1A6NED2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 MEIS3P1-201ENST00000495167 958 ntBASIC16.03■□□□□ 0.16
RCCD1A6NED2 AC026410.3-201ENST00000514280 936 ntBASIC16.03■□□□□ 0.16
RCCD1A6NED2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 BNIP3P41-202ENST00000616656 861 ntBASIC16.03■□□□□ 0.16
RCCD1A6NED2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCCD1A6NED2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.03■□□□□ 0.16
RCCD1A6NED2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 CNN2P2-201ENST00000443536 909 ntBASIC16.02■□□□□ 0.16
RCCD1A6NED2 CNN2P3-201ENST00000450201 906 ntBASIC16.02■□□□□ 0.16
RCCD1A6NED2 AC009477.1-201ENST00000452936 217 ntBASIC16.02■□□□□ 0.16
RCCD1A6NED2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 AP000240.1-201ENST00000609910 452 ntBASIC16.02■□□□□ 0.16
RCCD1A6NED2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 AL136317.3-201ENST00000618497 906 ntBASIC16.02■□□□□ 0.16
RCCD1A6NED2 AC139530.3-201ENST00000620344 690 ntBASIC16.02■□□□□ 0.16
RCCD1A6NED2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCCD1A6NED2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
RCCD1A6NED2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCCD1A6NED2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCCD1A6NED2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RCCD1A6NED2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RCCD1A6NED2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.02■□□□□ 0.15
RCCD1A6NED2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RCCD1A6NED2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCCD1A6NED2 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCCD1A6NED2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.02■□□□□ 0.15
RCCD1A6NED2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms