Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 AL512638.1-201ENST00000457493 794 ntBASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 AC073592.8-201ENST00000624126 511 ntBASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 SLC6A6P1-201ENST00000413933 1850 ntBASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
R3HCC1Q9Y3T6 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 AC027369.6-201ENST00000525520 931 ntBASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 NUTM2HP-201ENST00000442076 2498 ntBASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
R3HCC1Q9Y3T6 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
R3HCC1Q9Y3T6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
R3HCC1Q9Y3T6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.39■□□□□ 0.38
R3HCC1Q9Y3T6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
R3HCC1Q9Y3T6 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.39■□□□□ 0.37
R3HCC1Q9Y3T6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms