Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 TARDBPP1-201ENST00000442013 1203 ntBASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 SDHAP3-202ENST00000515467 728 ntBASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HHLA3Q9XRX5 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AC241585.1-201ENST00000433527 519 ntBASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AL512638.1-201ENST00000457493 794 ntBASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 DUX4L27-201ENST00000554796 1261 ntBASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AC106028.4-201ENST00000614509 607 ntBASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 MST1P2-201ENST00000457982 2291 ntBASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
HHLA3Q9XRX5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.1□□□□□ -0.63
HHLA3Q9XRX5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms