Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 GK-202ENST00000378941 458 ntTSL 3 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 AP001582.1-201ENST00000525856 295 ntBASIC16.52■□□□□ 0.24
L1RE1Q9UN81 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 AL162274.1-201ENST00000617191 1098 ntBASIC16.52■□□□□ 0.24
L1RE1Q9UN81 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
L1RE1Q9UN81 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
L1RE1Q9UN81 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AC112492.5-201ENST00000421897 457 ntBASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 HILS1-202ENST00000545329 423 ntBASIC16.51■□□□□ 0.23
L1RE1Q9UN81 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AP001063.1-201ENST00000568332 529 ntBASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AC106886.1-201ENST00000568660 600 ntBASIC16.51■□□□□ 0.23
L1RE1Q9UN81 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.51■□□□□ 0.23
L1RE1Q9UN81 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
L1RE1Q9UN81 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms