Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 ANKRD19P-201ENST00000338192 862 ntBASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 MIR1909-201ENST00000411312 80 ntBASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 CTBP2P5-201ENST00000454986 1264 ntBASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 GPR53P-205ENST00000457298 1084 ntBASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 AP003171.2-201ENST00000528208 925 ntBASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 HILS1-202ENST00000545329 423 ntBASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 SNX29P1-201ENST00000548357 1007 ntBASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHA4Q9UN74 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 AC020910.5-201ENST00000623668 1865 ntBASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 AP000593.2-201ENST00000542775 1433 ntBASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 FAM8A4P-201ENST00000435433 1213 ntBASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 KLF2P4-201ENST00000451959 1225 ntBASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 AC131206.1-201ENST00000538078 1211 ntBASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 AC239800.4-201ENST00000603712 296 ntBASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHA4Q9UN74 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHA4Q9UN74 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms