Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RIMBP3Q9UFD9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AC092573.1-201ENST00000433054 884 ntBASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 HNRNPA1P56-201ENST00000505767 954 ntBASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 MIR4459-201ENST00000581837 66 ntBASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RIMBP3Q9UFD9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 BAK1P2-201ENST00000532665 631 ntBASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 ABCD1P3-201ENST00000562927 605 ntBASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 PDXDC2P-206ENST00000534700 1315 ntBASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC22.85■■□□□ 1.25
RIMBP3Q9UFD9 F10-203ENST00000409306 1450 ntTSL 3 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 MIR632-201ENST00000385193 94 ntBASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 DNM1P46-202ENST00000415963 882 ntBASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 HNRNPA1P72-201ENST00000529511 967 ntBASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC22.84■■□□□ 1.25
RIMBP3Q9UFD9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 ABCD1P4-201ENST00000399687 604 ntBASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 GAS5-209ENST00000430245 723 ntTSL 3 BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 UGT1A12P-201ENST00000447084 853 ntBASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 RNA5SP288-201ENST00000516075 93 ntBASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RIMBP3Q9UFD9 KF455155.1-201ENST00000604493 303 ntBASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms