Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 AL589739.1-201ENST00000607720 493 ntBASIC13.39□□□□□ -0.27
DUX4Q9UBX2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 AL138828.2-201ENST00000615812 383 ntBASIC13.39□□□□□ -0.27
DUX4Q9UBX2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.39□□□□□ -0.27
DUX4Q9UBX2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 RPL37AP1-201ENST00000412502 279 ntBASIC13.38□□□□□ -0.27
DUX4Q9UBX2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 AC067863.1-201ENST00000494933 530 ntBASIC13.38□□□□□ -0.27
DUX4Q9UBX2 IGHV3-42-201ENST00000520410 361 ntBASIC13.38□□□□□ -0.27
DUX4Q9UBX2 AC069120.2-201ENST00000524091 540 ntBASIC13.38□□□□□ -0.27
DUX4Q9UBX2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 AL079307.3-201ENST00000556114 283 ntBASIC13.38□□□□□ -0.27
DUX4Q9UBX2 AC140878.1-201ENST00000565277 250 ntBASIC13.38□□□□□ -0.27
DUX4Q9UBX2 AC005498.2-205ENST00000593218 784 ntBASIC13.38□□□□□ -0.27
DUX4Q9UBX2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 FGD5P1-202ENST00000614866 2498 ntBASIC13.38□□□□□ -0.27
DUX4Q9UBX2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DUX4Q9UBX2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 TCAF1P1-201ENST00000414990 2232 ntBASIC13.37□□□□□ -0.27
DUX4Q9UBX2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.37□□□□□ -0.27
DUX4Q9UBX2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
DUX4Q9UBX2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms