Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 AL390755.1-201ENST00000623716 2027 ntBASIC13.28□□□□□ -0.28
ELL3Q9HB65 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.28□□□□□ -0.28
ELL3Q9HB65 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ELL3Q9HB65 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
ELL3Q9HB65 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ELL3Q9HB65 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ELL3Q9HB65 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.27□□□□□ -0.28
ELL3Q9HB65 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ELL3Q9HB65 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ELL3Q9HB65 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ELL3Q9HB65 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.27□□□□□ -0.28
ELL3Q9HB65 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.27□□□□□ -0.28
ELL3Q9HB65 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 AC092580.3-201ENST00000430932 139 ntBASIC13.27□□□□□ -0.29
ELL3Q9HB65 HIST3H2BA-201ENST00000436555 524 ntBASIC13.27□□□□□ -0.29
ELL3Q9HB65 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 SLED1-202ENST00000512051 380 ntBASIC13.27□□□□□ -0.29
ELL3Q9HB65 AC027369.6-201ENST00000525520 931 ntBASIC13.27□□□□□ -0.29
ELL3Q9HB65 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 AC027796.2-201ENST00000575326 344 ntBASIC13.27□□□□□ -0.29
ELL3Q9HB65 AC015911.4-201ENST00000588022 1070 ntBASIC13.27□□□□□ -0.29
ELL3Q9HB65 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.27□□□□□ -0.29
ELL3Q9HB65 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
ELL3Q9HB65 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ELL3Q9HB65 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ELL3Q9HB65 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.26□□□□□ -0.29
ELL3Q9HB65 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms